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Protein
Submitted name:

Superoxide dismutase, copper/zinc binding protein

Gene

Bcen2424_2434

Organism
Burkholderia cenocepacia (strain HI2424)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBCEN331272:GHR7-2503-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase, copper/zinc binding proteinImported
Gene namesi
Ordered Locus Names:Bcen2424_2434Imported
OrganismiBurkholderia cenocepacia (strain HI2424)Imported
Taxonomic identifieri331272 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000776 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3636 PotentialImportedAdd
BLAST
Chaini37 – 178142 PotentialImportedPRO_5000164962Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliA0K9K7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiTIVDKQI.
OrthoDBiEOG6K13RS.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A0K9K7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQRHHGVRA GRARRALLAA AALGLLAGCT SFSSSHEKRA DAQLQPTVGA
60 70 80 90 100
QARGAVTFVE RPDGVQVTYN LVGLPPNSDH ALQVHERGDC NAGDGSSAGQ
110 120 130 140 150
VFAPAADRLR AGARVAGDLG NIHADANGVA AGFIVAPDLA LDGVRSAMNR
160 170
AALVHRDSSD PAFPQHGAGP ALACGVIR
Length:178
Mass (Da):18,178
Last modified:December 12, 2006 - v1
Checksum:i6DD8EFBAD3D75F0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000458 Genomic DNA. Translation: ABK09184.1.
RefSeqiWP_011545956.1. NC_008542.1.
YP_836077.1. NC_008542.1.

Genome annotation databases

EnsemblBacteriaiABK09184; ABK09184; Bcen2424_2434.
KEGGibch:Bcen2424_2434.
PATRICi19062286. VBIBurCen15205_2482.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000458 Genomic DNA. Translation: ABK09184.1.
RefSeqiWP_011545956.1. NC_008542.1.
YP_836077.1. NC_008542.1.

3D structure databases

ProteinModelPortaliA0K9K7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK09184; ABK09184; Bcen2424_2434.
KEGGibch:Bcen2424_2434.
PATRICi19062286. VBIBurCen15205_2482.

Phylogenomic databases

eggNOGiCOG2032.
HOGENOMiHOG000263448.
KOiK04565.
OMAiTIVDKQI.
OrthoDBiEOG6K13RS.

Enzyme and pathway databases

BioCyciBCEN331272:GHR7-2503-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome 1 of Burkholderia cenocepacia HI2424."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
    , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HI2424Imported.

Entry informationi

Entry nameiA0K9K7_BURCH
AccessioniPrimary (citable) accession number: A0K9K7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: June 24, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.