A0JZ18 (A0JZ18_ARTS2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Isoamylase EMBL ABK04288.1

Gene names

Ordered Locus Names:

Arth_2909

Organism

Arthrobacter sp. (strain FB24) [Complete proteome] [HAMAP] EMBL ABK04288.1

Taxonomic identifier

290399 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length	751 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glycogen debranching enzyme activity Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0JZ18 [UniParc]. Last modified December 12, 2006. Version 1. Checksum: B13DD279EC137742	FASTA	751	84,076
	10 20 30 40 50 60 MEVWPGSAYP LGATFNGTGT NFALFSERAE KVELCLFDDE GGETRIELLE VDGYVWHCYL 70 80 90 100 110 120 PHIQPGQKYG YRVHGPYDPD SGNRFNPNKL LLDPYAKAVH GQIDWDPALF SYNMGDPDSR 130 140 150 160 170 180 NDADSAPHMM MGVVINPFFD WDGDHLPRVP YHKSVIYEAH VKGLTQLHPE VPEDQRGTYA 190 200 210 220 230 240 GVAHPSVISH LQKLGITAIE LMPVHQFVND GILEDKGLNN YWGYNTIGFF APHNSYSSTG 250 260 270 280 290 300 DTGQQVQDFK AMVRSLHQAG IEVILDVVYN HTAEGNHLGP TLSFKGIDNA AYYRLMDGDE 310 320 330 340 350 360 KHYMDYTGTG NSLNVRHPHS LQLLMDSLRY WVTEMHVDGF RFDLASTLAR EFYDVDKLST 370 380 390 400 410 420 FFELIQQDPV VSQVKLIAEP WDVGPGGYQV GNFPPQWTEW NGKYRDTVRD FWRGEPATLG 430 440 450 460 470 480 EFASRITGSA DLYEHSGRRP VASINFVTAH DGFTLHDLVS YNEKHNEANG EDNNDGESHN 490 500 510 520 530 540 RSWNCGAEGP TDDPKVLGLR ARQQRNFIAS LLLSQGVPMI LHGDEMGRTQ QGNNNGYCQD 550 560 570 580 590 600 SELTWINWDA VDQPLVEFTA AVNALRHKHP TFRRSRFFDG RPVLRGEGER LPDIEWLDVD 610 620 630 640 650 660 GSTMKPEDWD SGFGRSVGMF LNGDGIRGRD ERGRRITDVN FVLYFNAHDD EVKFTLPSDE 670 680 690 700 710 720 YAPAWDIIID TAGHNADTEP VEAGGSLPVD AKSLVVLRAH STPEVEPDHS VAASLAALSQ 730 740 750 TTTSETEALT TPIVPEPPHT KKVRSKGQED S

References

[1]

"Complete sequence of chromosome 1 of Arthrobacter sp. FB24." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Beasley F., Chen W., Jerke K., Nakatsu C.H., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: FB24.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000454 Genomic DNA. Translation: ABK04288.1.
RefSeq	YP_832388.1. NC_008541.1.
3D structure databases
ProteinModelPortal	A0JZ18.
ModBase	Search...
Protein-protein interaction databases
STRING	A0JZ18.
Protein family/group databases
CAZy	CBM48. Carbohydrate-Binding Module Family 48. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4444431.
GenomeReviews	Gene locus Arth_2909 in contig CP000454_GR.
KEGG	art:Arth_2909.
PATRIC	21001229. VBIArtSp72239_3297.
TIGR	Arth_2909.
Phylogenomic databases
eggNOG	COG1523.
HOGENOM	HBG350946.
OMA	QPLVEFT.
PhylomeDB	A0JZ18.
ProtClustDB	CLSK849610.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR013780. Glyco_hydro_13_b. IPR006047. Glyco_hydro_13_cat_dom. IPR004193. Glyco_hydro_13_N. IPR013781. Glyco_hydro_subgr_catalytic. IPR011837. Glycogen_debranch_debranch. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KO	K02438.
PANTHER	PTHR10357. Alpha_amylase. 1 hit. PTHR10357:SF74. PTHR10357:SF74. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02922. CBM_48. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
TIGRFAMs	TIGR02100. GlgX_debranch. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A0JZ18_ARTS2

Accession

Primary (citable) accession number: A0JZ18

Entry history

Integrated into UniProtKB/TrEMBL:	December 12, 2006
Last sequence update:	December 12, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)