A0JXN9 (XYLA_ARTS2) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 47.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Xylose isomerase EC=5.3.1.5 | ||||
| Gene names |
| ||||
| Organism | Arthrobacter sp. (strain FB24) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 290399 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter![]() |
Protein attributes
| Sequence length | 395 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | D-xylose = D-xylulose. HAMAP-Rule MF_00455 |
| Cofactor | Binds 2 magnesium ions per subunit By similarity. |
| Subunit structure | Homotetramer By similarity. |
| Subcellular location | Cytoplasm By similarity. |
| Sequence similarities | Belongs to the xylose isomerase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Pentose shunt Xylose metabolism |
| Cellular component | Cytoplasm |
| Ligand | Magnesium Metal-binding |
| Molecular function | Isomerase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | D-xylose metabolic process Inferred from electronic annotation. Source: HAMAP pentose-phosphate shuntInferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | magnesium ion binding Inferred from electronic annotation. Source: HAMAP xylose isomerase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 395 | 395 | Xylose isomerase HAMAP-Rule MF_00455 | PRO_1000026428 | |||||
Sites | |||||||||
| Active site | 54 | 1 | By similarity | ||||||
| Active site | 57 | 1 | By similarity | ||||||
| Metal binding | 181 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 217 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 217 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 220 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 245 | 1 | Magnesium 1 By similarity | ||||||
| Metal binding | 255 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 257 | 1 | Magnesium 2 By similarity | ||||||
| Metal binding | 293 | 1 | Magnesium 1 By similarity | ||||||
Sequences
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References
| [1] | "Complete sequence of chromosome 1 of Arthrobacter sp. FB24." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. Richardson P.Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: FB24. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000454 Genomic DNA. Translation: ABK03809.1. |
| RefSeq | YP_831909.1. NC_008541.1. |
3D structure databases | |
| ProteinModelPortal | A0JXN9. |
| SMR | A0JXN9. Positions 3-395. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 290399.Arth_2430. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ABK03809; ABK03809; Arth_2430. |
| GeneID | 4445032. |
| KEGG | art:Arth_2430. |
| PATRIC | 21000219. VBIArtSp72239_2802. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG2115. |
| HOGENOM | HOG000022596. |
| KO | K01805. |
| OMA | DLVFGHG. |
| ProtClustDB | PRK12677. |
Enzyme and pathway databases | |
| BioCyc | ASP290399:GHIF-2475-MONOMER. |
Family and domain databases | |
| Gene3D | 3.20.20.150. 1 hit. |
| HAMAP | MF_00455. Xylose_isom_A. |
| InterPro | IPR013022. Xyl_isomerase-like_TIM-brl. IPR013453. XylA_actinobac. IPR001998. Xylose_isomerase. [Graphical view] |
| Pfam | PF01261. AP_endonuc_2. 1 hit. [Graphical view] |
| PRINTS | PR00688. XYLOSISMRASE. |
| SUPFAM | SSF51658. Xyl_isomerase-like_TIM-brl. 1 hit. |
| TIGRFAMs | TIGR02631. xylA_Arthro. 1 hit. |
| PROSITE | PS51415. XYLOSE_ISOMERASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | XYLA_ARTS2 | ||||||||
| Accession | Primary (citable) accession number: A0JXN9 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

Clusters with
