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A0JVM2 (A0JVM2_ARTS2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hyaluronate lyase EMBL ABK03092.1
EC=4.2.2.1 EMBL ABK03092.1
Gene names
Ordered Locus Names:Arth_1698
OrganismArthrobacter sp. (strain FB24) [Complete proteome] [HAMAP] EMBL ABK03092.1
Taxonomic identifier290399 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length793 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABK03092.1
   Molecular functionLyase EMBL ABK03092.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functioncarbohydrate binding

Inferred from electronic annotation. Source: InterPro

hyaluronate lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL ABK03092.1
Chain32 – 793762 Potential EMBL ABK03092.1
PRO_5000164220

Sequences

Sequence LengthMass (Da)Tools
A0JVM2 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: 7CF06027F058D290

FASTA79384,545
        10         20         30         40         50         60 
MTREFSRRTA LKGAALSGLL LAMVHGPAHA AATANATLTP ADFAGLRQRW VDQITGRKVL 

        70         80         90        100        110        120 
VAGDNDFVTA LAALDKKART AIDLLERSAG RLTVFSDLSL AKDTDLVTTH TRLATMATAW 

       130        140        150        160        170        180 
ATPGSEHFAD AGLLAAIRAG LADANSLCYN ASKEEQGNWW SWEIGTPKAL ADTMVLLHAE 

       190        200        210        220        230        240 
LTAAERAAYC AAIDHFVPDP WQQFPPKRGK ITSVGANRVD LCQAVTIRSL VDEDAEKLTH 

       250        260        270        280        290        300 
AVAGLSEVWQ YVSAGNGFFT DGSFIQHSTT PYTGSYGVVL LTGLSKLFAL LGGTGAEVSD 

       310        320        330        340        350        360 
PSRDILFKTV EGSFAPFMVA GAMADSVRGR SISRESNTGF DLGASTIESI LLLARAVDPV 

       370        380        390        400        410        420 
TARRWRSLCL AWINQNRKAP ILADAGVGRT ALVKELLAMG LTETDLPGGH YLFPAMDRTM 

       430        440        450        460        470        480 
HHSQGWTLST AMASSRIAWY ECGNGENNRG YHTGSGMTYV YDGDLGQYDD AFWATANHCR 

       490        500        510        520        530        540 
LPGITVDTSS LPDKVEGEWG AATPANEWTG STAYGDVAAV GQHLIGPGGT GLTARKSWFV 

       550        560        570        580        590        600 
SKDVIVCLGA DIRTGSGSRI ETVVDHRNLH AGFNAMGTAA GTVAATPGHP EVLTVDRWVH 

       610        620        630        640        650        660 
LEGFGGYVVL DAAPLQVLRE QREGSWSEVN VKGSAARQTR NYATLYFDHG HEPEAASYAY 

       670        680        690        700        710        720 
LVAPGASASM TSSLSGQSFH TVLRNDEVAQ AVKFKKEKTT AATFWRPGTV GDLALSGPAC 

       730        740        750        760        770        780 
VVVKEVGDRL SIAVSDPTQN ASTLTLRLKT KRFFRIIEGQ GASLSHGADG FTVLEVDIAN 

       790 
HAGRTKQIEL SAE

« Hide

References

[1]"Complete sequence of chromosome 1 of Arthrobacter sp. FB24."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Beasley F., Chen W., Jerke K., Nakatsu C.H., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FB24.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000454 Genomic DNA. Translation: ABK03092.1.
RefSeqYP_831192.1. NC_008541.1.

3D structure databases

ProteinModelPortalA0JVM2.
SMRA0JVM2. Positions 41-790.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0JVM2.

Protein family/group databases

CAZyPL8. Polysaccharide Lyase Family 8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4445771.
GenomeReviewsGene locus Arth_1698 in contig CP000454_GR.
KEGGart:Arth_1698.
PATRIC20998723. VBIArtSp72239_2060.
TIGRArth_1698.

Phylogenomic databases

eggNOGNOG04835.
HOGENOMHBG699337.
OMATKTYRNI.

Family and domain databases

InterProIPR008929. Chondroitin_lyas.
IPR011013. Glyco_hydro-type_carb-bd.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR011071. Lyase_8-like_C.
IPR012970. Lyase_8_alpha_N.
IPR004103. Lyase_8_C.
IPR003159. Lyase_8_central_dom.
IPR012329. Lyase_8_N.
IPR006311. TAT_signal.
[Graphical view]
Gene3DG3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit.
G3DSA:2.60.220.10. Lyase_8_C. 1 hit.
G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
KOK01727.
PfamPF02278. Lyase_8. 1 hit.
PF02884. Lyase_8_C. 1 hit.
PF08124. Lyase_8_N. 1 hit.
[Graphical view]
SUPFAMSSF48230. Chondroitin_lyas. 1 hit.
SSF74650. Gal_mut_like. 1 hit.
SSF49863. Lyase_like_C. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0JVM2_ARTS2
AccessionPrimary (citable) accession number: A0JVM2
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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