Skip Header

Contribute Send feedback
Read comments (?) or add your own

A0JV86 (RSMH_ARTS2) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosomal RNA small subunit methyltransferase H
EC=2.1.1.199
Alternative name(s):
16S rRNA m(4)C1402 methyltransferase
rRNA (cytosine-N(4)-)-methyltransferase RsmH
Gene names
Name:rsmH
Synonyms:mraW
Ordered Locus Names:Arth_1562
OrganismArthrobacter sp. (strain FB24) [Complete proteome] [HAMAP]
Taxonomic identifier290399 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length332 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA By similarity. HAMAP MF_01007

Catalytic activity

S-adenosyl-L-methionine + cytosine(1402) in 16S rRNA = S-adenosyl-L-homocysteine + N(4)-methylcytosine(1402) in 16S rRNA. HAMAP MF_01007

Subcellular location

Cytoplasm By similarity HAMAP MF_01007.

Sequence similarities

Belongs to the methyltransferase superfamily. RsmH family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   LigandS-adenosyl-L-methionine
   Molecular functionMethyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processrRNA processing

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmethyltransferase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 332332Ribosomal RNA small subunit methyltransferase H HAMAP MF_01007
PRO_0000386720

Regions

Region50 – 523S-adenosyl-L-methionine binding By similarity

Sites

Binding site691S-adenosyl-L-methionine By similarity
Binding site1031S-adenosyl-L-methionine; via amide nitrogen By similarity
Binding site1171S-adenosyl-L-methionine By similarity
Binding site1241S-adenosyl-L-methionine By similarity

Sequences

Sequence LengthMass (Da)Tools
A0JV86 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: B38C596A16CDFB7C

FASTA33236,299
        10         20         30         40         50         60 
MSDPNQPKPT SERHVPVLKD RCINLLAPGI EAARQRGETP VVIDATLGMG GHSEALLQRF 

        70         80         90        100        110        120 
PDLHLIGIDR DEEALALAGE RLKPFADRTD LVHAVYDEIP DVLRDLGVSE VHGVLMDLGV 

       130        140        150        160        170        180 
SSLQLDERER GFAYSFDAPL DMRMDTSRGQ TAADVVNNYS EEDLVRIIRK WGEEKFAGRI 

       190        200        210        220        230        240 
ANRIVAAREA KPFATTGELV DTIRAVVPAG AAKTGGHPAK RTFQALRIEV NEELDVLERA 

       250        260        270        280        290        300 
VPAAVDALAM GGRVVVMSYH SLEDKIVKKV FQTGSKSSAP LGFPVELEEH KPELKTLTKG 

       310        320        330 
TEVPTADEIA ENPRAASARL RAVERIRARR AA

« Hide

References

[1]"Complete sequence of chromosome 1 of Arthrobacter sp. FB24."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Beasley F., Chen W., Jerke K., Nakatsu C.H., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FB24.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000454 Genomic DNA. Translation: ABK02956.1.
RefSeqYP_831056.1. NC_008541.1.

3D structure databases

ProteinModelPortalA0JV86.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0JV86.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4445929.
GenomeReviewsGene locus Arth_1562 in contig CP000454_GR.
KEGGart:Arth_1562.
PATRIC20998433. VBIArtSp72239_1922.
TIGRArth_1562.

Phylogenomic databases

eggNOGCOG0275.
HOGENOMHBG302779.
OMANPATRAF.
PhylomeDBA0JV86.
ProtClustDBPRK00050.

Enzyme and pathway databases

BioCycASP1667:ARTH_1562-MONOMER.

Family and domain databases

HAMAPMF_01007. 16SrRNA_methyltr_H.
[Tree]
InterProIPR002903. SAM-dep_MeTrfase_MraW.
IPR023397. SAM-dep_MeTrfase_MraW_recog.
[Graphical view]
Gene3DG3DSA:1.10.150.170. G3DSA:1.10.150.170. 1 hit.
KOK03438.
PANTHERPTHR11265. Bact_methyltrans. 1 hit.
PfamPF01795. Methyltransf_5. 1 hit.
[Graphical view]
PIRSFPIRSF004486. MraW. 1 hit.
SUPFAMSSF81799. SSF81799. 1 hit.
TIGRFAMsTIGR00006. TIGR00006. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRSMH_ARTS2
AccessionPrimary (citable) accession number: A0JV86
Entry history
Integrated into UniProtKB/Swiss-Prot: November 3, 2009
Last sequence update: December 12, 2006
Last modified: January 25, 2012
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents