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A0JUC2 (A0JUC2_ARTS2) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 44. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Deoxyribose-phosphate aldolase HAMAP MF_00114
Short name=DERA HAMAP MF_00114
EC=4.1.2.4 HAMAP MF_00114
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase HAMAP MF_00114
Phosphodeoxyriboaldolase HAMAP MF_00114
Gene names
Name:deoC HAMAP MF_00114
Ordered Locus Names:Arth_1248
OrganismArthrobacter sp. (strain FB24) [Complete proteome] [HAMAP] EMBL ABK02642.1
Taxonomic identifier290399 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Micrococcaceae › Arthrobacter

Protein attributes

Sequence length247 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. HAMAP MF_00114 SAAS SAAS022979

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. HAMAP MF_00114 SAAS SAAS022979

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. HAMAP MF_00114 SAAS SAAS022979

Subcellular location

Cytoplasm By similarity HAMAP MF_00114 SAAS SAAS022979.

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. HAMAP MF_00114

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1781Schiff-base intermediate with acetaldehyde By similarity HAMAP MF_00114
Active site2071 By similarity HAMAP MF_00114

Sequences

Sequence LengthMass (Da)Tools
A0JUC2 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: BFBD28FA8AFEA649

FASTA24724,700
        10         20         30         40         50         60 
MSNEATAAGV SETPAGPTAP GATAPGEIAS FIDHTLLKPE ASEAEILKVC SEAAEYHFKS 

        70         80         90        100        110        120 
VCVNPVWVKT VTTALKGSGV LTCSVVGFPL GATPTDVKAF EARGAVLDGA DEVDMVINIA 

       130        140        150        160        170        180 
AARADDKGAL VDDIRAVAEA VHGSDAILKV IIETALLSDS QKVLACEAAV EAGADFVKTS 

       190        200        210        220        230        240 
TGFNGGGATV EDVALMRRTV GPDVGVKASG GVRSLADAQA MIAAGATRIG ASSGIAIVKG 


EQGSSAY

« Hide

References

[1]"Complete sequence of chromosome 1 of Arthrobacter sp. FB24."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Beasley F., Chen W., Jerke K., Nakatsu C.H., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FB24.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000454 Genomic DNA. Translation: ABK02642.1.
RefSeqYP_830742.1. NC_008541.1.

3D structure databases

ProteinModelPortalA0JUC2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0JUC2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4446225.
GenomeReviewsGene locus Arth_1248 in contig CP000454_GR.
KEGGart:Arth_1248.
PATRIC20997771. VBIArtSp72239_1598.
TIGRArth_1248.

Phylogenomic databases

eggNOGCOG0274.
HOGENOMHBG636421.
OMAIDHTNLK.
PhylomeDBA0JUC2.
ProtClustDBPRK00507.

Family and domain databases

HAMAPMF_00114. DeoC_type1.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
IPR022979. Deoxyribose_phosphate_aldo_1.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0JUC2_ARTS2
AccessionPrimary (citable) accession number: A0JUC2
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: December 14, 2011
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info