Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A0JRM5 (A0JRM5_ARTS2) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=6.5.1.1 EMBL ABK01695.1
Gene names
Ordered Locus Names:Arth_0294 EMBL ABK01695.1
OrganismArthrobacter sp. (strain FB24) [Complete proteome] [HAMAP] EMBL ABK01695.1
Taxonomic identifier290399 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter

Protein attributes

Sequence length845 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A0JRM5 [UniParc].

Last modified December 12, 2006. Version 1.
Checksum: 5FE4487128634C0A

FASTA84592,365
        10         20         30         40         50         60 
MAGSRERVRI QGRELVVTNL DKVMYPETGT TKADVLAYYT AVAPVLVPAA VNRPATRKRW 

        70         80         90        100        110        120 
VNGVGTAEAP GEMFFQKNLE DSTPGWIPRA SIRHKERTNQ YPLVNDAATL IWLAQMGSLE 

       130        140        150        160        170        180 
IHVPQWRVDP HGNPMNPDRL VLDLDPGEGA GLAECAEVAR LARAILRDVG LDPIPVTSGS 

       190        200        210        220        230        240 
KGVHLYAGLD GTQSSDQISE FAHELARALE SDHPDLAVSD MKKTLRTGKV LVDWSQNNAA 

       250        260        270        280        290        300 
KTTIVPYSLR GRLRPTVAAP RTWRELASPK LKQLDYREVM RRVKDGKDPF APVSAGGSHV 

       310        320        330        340        350        360 
RGHPGGGGSA AGPRDSTTAD GGSTDPRLEK YRSMRDPEGT PEPFSADRHG ADPNAGTIRE 

       370        380        390        400        410        420 
RFVIQEHHAS RLHYDFRLER DGVLVSWALP KGVPTSGTQN HLAVQTEDHP MDYLDFEGTI 

       430        440        450        460        470        480 
PKGQYGAGNV TIWDHGYYEC DKWIAGKEVI ATLTGADGGG LGGTRKFALI RTSRDSDTSK 

       490        500        510        520        530        540 
SPEQAQWLIH LMDRKGHAPA ATGTPPATGG PAEAAKQDEP PPDLSPAPDF LPMMASAGTP 

       550        560        570        580        590        600 
ADLRGLDWQF ELKWDGIRAL IIGDADRIRL ISRNGNDMTA SYPELTDRSC WPEQSFTADG 

       610        620        630        640        650        660 
EIVAVGPSGR PDFGLLQTRM KLTKAADVAK ARAATPVRLM VFDLLSDAGE DLRRMPLRRR 

       670        680        690        700        710        720 
RARLEQLDWP DGCPVHLSEV LDHEVEHILE SARELGLEGI MAKRLDGRYV SGERSRSWLK 

       730        740        750        760        770        780 
LKFERTQEVV VGGWRPGKGS RQGSVGSLLV GIPDGAKLRY VGRVGSGFSD RELKELRLQV 

       790        800        810        820        830        840 
DTLSRKTSPF TEVPAADASD AHWVAPGLVG EVTFGEWTGG GKLRHPVWRG WRLDKNADDV 


VAESG 

« Hide

References

[1]"Complete sequence of chromosome 1 of Arthrobacter sp. FB24."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chertkov O., Thompson S., Brettin T., Bruce D., Han C., Tapia R., Gilna P. expand/collapse author list , Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Beasley F., Chen W., Jerke K., Nakatsu C.H., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FB24 EMBL ABK01695.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000454 Genomic DNA. Translation: ABK01695.1.
RefSeqYP_829795.1. NC_008541.1.

3D structure databases

ProteinModelPortalA0JRM5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290399.Arth_0294.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK01695; ABK01695; Arth_0294.
GeneID4447228.
KEGGart:Arth_0294.
PATRIC20995823. VBIArtSp72239_0643.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMASKGIHLY.
OrthoDBEOG661H49.
ProtClustDBPRK09632.

Enzyme and pathway databases

BioCycASP290399:GHIF-300-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0JRM5_ARTS2
AccessionPrimary (citable) accession number: A0JRM5
Entry history
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: November 13, 2013
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)