Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

A0JP82

- A0JP82_XENTR

UniProt

A0JP82 - A0JP82_XENTR

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

LOC100036628 protein

Gene

tet3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi65 – 651Zinc 1Imported
Metal bindingi68 – 681Zinc 1Imported
Metal bindingi71 – 711Zinc 1Imported
Metal bindingi77 – 771Zinc 2Imported
Metal bindingi80 – 801Zinc 2Imported
Metal bindingi83 – 831Zinc 2Imported
Metal bindingi93 – 931Zinc 2Imported
Metal bindingi98 – 981Zinc 1Imported

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Metal-bindingImported, ZincImported

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100036628 proteinImported
Gene namesi
Name:tet3Imported
Synonyms:LOC100036628Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana

Organism-specific databases

XenbaseiXB-GENE-877084. tet3.

PTM / Processingi

Proteomic databases

PaxDbiA0JP82.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000026387.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4HP1X-ray2.25C58-111[»]
4HP3X-ray2.05C58-111[»]
ProteinModelPortaliA0JP82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG76473.
HOGENOMiHOG000154550.
HOVERGENiHBG079550.

Family and domain databases

InterProiIPR024779. 2OGFeDO_nucleic_acid_mod.
IPR002857. Znf_CXXC.
[Graphical view]
PfamiPF12851. Tet_JBP. 1 hit.
PF02008. zf-CXXC. 1 hit.
[Graphical view]
PROSITEiPS51058. ZF_CXXC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0JP82-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDTQPAPVPH VLPQDVYEFP DDQESLGRLR VSEMPAELNG GGGGGSAAAF
60 70 80 90 100
AMELPEQSNK KRKRCGVCVP CLRKEPCGAC YNCVNRSTSH QICKMRKCEQ
110 120 130 140 150
LKKKRVVPMK GVENCSESIL VDGPKTDQME AGPVNHVQEG RLKQECDSTL
160 170 180 190 200
PSKGCEDLAN QLLMEANSWL SNTAAPQDPC NKLNWDKPTI PNHAANNNSN
210 220 230 240 250
LEDAKNLVAF SAVAEAMSTY GMPASGTPSS VSLQLYEKFN YETNRDNSGH
260 270 280 290 300
LEGNAPSCPE DLNTLKAALA LAKHGVKPPN CNCDGPECPD YLEWLENKIK
310 320 330 340 350
STVKGSQESP FPNLGQVSKE LVQKQYPKEQ VLNLENKNST CPSGNLPFSQ
360 370 380 390 400
NALSLAKEKN ISLQTAIAIE ALTQLSSALP QTNNECPNAP SQPLINPHDQ
410 420 430 440 450
LTHFPSAKGN QLPMLPVARN ELFQNQQSQL YTGKNALPVP QSPRQTSWEQ
460 470 480 490 500
NKKSSYQEGQ YIPENLSHSS SVLPSDASTP QKPEFLQQWV QNADLLKSPS
510 520 530 540 550
DPMTGLKQLL GNTDEYIKSV FKGPEALPNK KNVKPKHTIK SIKKESTEFL
560 570 580 590 600
KMSPDQQLSQ LLQTNEFHRN TQAALQQHLH HKRNLFVDPN AMEACTQEQQ
610 620 630 640 650
NWWVPSSQQA PVSKTTEKPV KERKKRRQSP SQKQVEPKPK PQRKQVQIKK
660 670 680 690 700
PKVKEGSAVF MPVSQISLDT FRRVEKEENQ GKEMDAENSL PNNVQTELLE
710 720 730 740 750
SQSLQLTGSQ ANPDDRKTVN TQEMCNENQS NIGKANNFAL CVNRANSFVA
760 770 780 790 800
KDQCPTPSTH DTSSSSGQGD SANQHTNVSD VPGQNDLSCL DDKLEDLIRQ
810 820 830 840 850
FEAEFGEDFS LPGSAVPSQN GEGPPKQTPS GDPQFKLPFP SQLLPPENST
860 870 880 890 900
KPATHSNPAL SNNPVSREVS NNLDSLFSSK SPKQIKIESS GAITVVSTTC
910 920 930 940 950
FYSEENQHLD GTPTKSDLPF NPTLSGFLDS PLKYLTSPTK SLIDTPAKKA
960 970 980 990 1000
QAEFPTCDCV EQINEKDEGP YYTHLGSGPT VASIRELMEE RFGQKGDAIR
1010 1020 1030 1040 1050
IEKVIYTGKE GKSSRGCPIA KWVIRRQSED EKLMCLVRQR AGHHCENAVI
1060 1070 1080 1090 1100
IILIMAWEGI PRSLGDSLYN DITETITKYG NPTSRRCGLN DDRTCACQGK
1110 1120 1130 1140 1150
DPNTCGASFS FGCSWSMYFN GCKYARSKTP RKFRLIGENP KEEDGLKDNF
1160 1170 1180 1190 1200
QNLATKVAPV YKMLAPQAYQ NQVNNEDIAI DCRLGLKEGR PFSGVTACMD
1210 1220 1230 1240 1250
FCAHAHKDQH NLYNGCTVVC TLTKEDNRMI GRVAEDEQLH VLPLYKVSTT
1260 1270 1280 1290 1300
DEFGSEEGQL EKIKKGGIHV LSSFPREVRK LSEPAKSCRQ RQLEAKKAAA
1310 1320 1330 1340 1350
EKKKLQKEKL VSPDKTKQEP SDKKTCQQNP GVPQQQTKPC IKVEPSNHYN
1360 1370 1380 1390 1400
NFKYNGNGVV ESYSVLGSCR PSDPYSMNSV YSYHSFYAQP NLPSVNGFHS
1410 1420 1430 1440 1450
KYALPPFGFY GFPNNPVVPN QFMNYGTSDA RNSGWMNNCF EKKPELQSLA
1460 1470 1480 1490 1500
DGMNQSYGSE LSEQSFRRSS EVPHHYSLQN PSSQKSVNVP HRTTPAPVET
1510 1520 1530 1540 1550
TPYSNLPCYN KVIKKEPGSD PLVDSFQRAN SVHSHSPGVN HSLQASDLPI
1560 1570 1580 1590 1600
SYKANGALSS SGRTNAESPC SMFMPNDKNG LEKKDYFGVH SNAPGLKDKQ
1610 1620 1630 1640 1650
WPPYGTDVSV RQHDSLDSQS PGKVWSSCKL SDSSAALPSS ASTQDKNWNG
1660 1670 1680 1690 1700
RQVSLNQGMK ESALFQEKLW NSVAASDRCS ATPSDRSSIT PCSELQDKNW
1710 1720 1730 1740 1750
GSFPNPTVNS LKTDSSQNHW DPYSLDDNMD DGQSKSVKEE DDEEIWSDSE
1760 1770 1780 1790 1800
HNFLDENIGG VAVAPGHGSI LIECARRELH ATTPLKKPNR CHPTRISLVF
1810 1820 1830 1840 1850
YQHKNLNQPN HGLALWEAKM KQLAERARAR EEEAAKLGIK QEVKSLGKKR
1860 1870 1880 1890 1900
KWGGAATTET PPVEKKDYTP TRQAATILTD SATTSFSYAY TKVTGPYSRF

I
Length:1,901
Mass (Da):210,426
Last modified:December 12, 2006 - v1
Checksum:iC74D3B847C920212
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC127289 mRNA. Translation: AAI27290.1.
RefSeqiNP_001090656.1. NM_001097187.1.
UniGeneiStr.53063.

Genome annotation databases

GeneIDi100036628.
KEGGixtr:100036628.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC127289 mRNA. Translation: AAI27290.1 .
RefSeqi NP_001090656.1. NM_001097187.1.
UniGenei Str.53063.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4HP1 X-ray 2.25 C 58-111 [» ]
4HP3 X-ray 2.05 C 58-111 [» ]
ProteinModelPortali A0JP82.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 8364.ENSXETP00000026387.

Proteomic databases

PaxDbi A0JP82.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100036628.
KEGGi xtr:100036628.

Organism-specific databases

CTDi 200424.
Xenbasei XB-GENE-877084. tet3.

Phylogenomic databases

eggNOGi NOG76473.
HOGENOMi HOG000154550.
HOVERGENi HBG079550.

Family and domain databases

InterProi IPR024779. 2OGFeDO_nucleic_acid_mod.
IPR002857. Znf_CXXC.
[Graphical view ]
Pfami PF12851. Tet_JBP. 1 hit.
PF02008. zf-CXXC. 1 hit.
[Graphical view ]
PROSITEi PS51058. ZF_CXXC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (NOV-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: TestesImported.
  2. "Tet3 CXXC domain and dioxygenase activity cooperatively regulate key genes for Xenopus eye and neural development."
    Xu Y., Xu C., Kato A., Tempel W., Abreu J.G., Bian C., Hu Y., Hu D., Zhao B., Cerovina T., Diao J., Wu F., He H.H., Cui Q., Clark E., Ma C., Barbara A., Veenstra G.J.
    , Xu G., Kaiser U.B., Liu X.S., Sugrue S.P., He X., Min J., Kato Y., Shi Y.G.
    Cell 151:1200-1213(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.05 ANGSTROMS) OF 58-111 IN COMPLEX WITH ZINC.

Entry informationi

Entry nameiA0JP82_XENTR
AccessioniPrimary (citable) accession number: A0JP82
Entry historyi
Integrated into UniProtKB/TrEMBL: December 12, 2006
Last sequence update: December 12, 2006
Last modified: October 29, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3