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A0JMM3

- A0JMM3_DANRE

UniProt

A0JMM3 - A0JMM3_DANRE

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Protein
Submitted name: Neu3.3
Gene
neu3.3
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Enzyme and pathway databases

    ReactomeiREACT_221391. Glycosphingolipid metabolism.
    REACT_221720. Sialic acid metabolism.

    Protein family/group databases

    CAZyiGH33. Glycoside Hydrolase Family 33.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Neu3.3Imported
    Submitted name:
    Neu3.3 proteinImported
    Submitted name:
    Sialidase 3.3Imported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:neu3.3Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 21

    Organism-specific databases

    ZFINiZDB-GENE-061103-511. neu3.3.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG84455.
    GeneTreeiENSGT00390000011171.
    HOGENOMiHOG000233778.
    HOVERGENiHBG052608.
    InParanoidiA0JMM3.
    KOiK12357.
    OMAiRECEEIA.
    OrthoDBiEOG7MSMNP.
    TreeFamiTF331063.

    Family and domain databases

    Gene3Di2.120.10.10. 1 hit.
    InterProiIPR026944. Sialidase-3.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF7. PTHR10628:SF7. 1 hit.
    SUPFAMiSSF50939. SSF50939. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A0JMM3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGNKTPSKSK SGYPKEMNTT TVFKQEQPQT WCCCFKKQVS YRIPALVYVS    50
    DEQTFLAFAE KRKTLNDTNA EVLVMRRGTW VDAKTKEVEW ICGHQVLSSA 100
    SLPNHRSMNP CPVYERDSKT LFLFFVCVPT QVSEFDQIRT NKSQGRLCYV 150
    TSKDAGKTWS QTIDLTADVI GEQVNEWAPF AVGPGHGVQT KNGRLIIPAY 200
    AYRYTGKTDC TSCCCLSFCC FTPYALAFYS DDQGITWKAG QQMDVESCEC 250
    QMAEIVGEKG DSTLYCNART RLGYRTEALS NNAGEDFDTV LSSSKLIETG 300
    KGCQGSVLSF VEQSSPPQTW LLYSHPSHPK KRVDLGLYLN KSPLDSSGWS 350
    DEPLMILHHG PSAYSDLVEF EPGHFACLME CGKEHENEEI AFLLFKLPEK 400
    KL 402
    Length:402
    Mass (Da):45,094
    Last modified:December 12, 2006 - v1
    Checksum:iAF2867F30357419E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU928016 Genomic DNA. No translation available.
    BC125931 mRNA. Translation: AAI25932.1.
    BC164496 mRNA. Translation: AAI64496.1.
    EF107698 mRNA. Translation: ABO30989.1.
    RefSeqiNP_001071006.1. NM_001077538.1.
    XP_005161237.1. XM_005161180.1.
    XP_005161238.1. XM_005161181.1.
    XP_005161239.1. XM_005161182.1.
    UniGeneiDr.91877.

    Genome annotation databases

    EnsembliENSDART00000081184; ENSDARP00000075627; ENSDARG00000058327.
    ENSDART00000084600; ENSDARP00000079035; ENSDARG00000058327.
    GeneIDi555206.
    KEGGidre:555206.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CU928016 Genomic DNA. No translation available.
    BC125931 mRNA. Translation: AAI25932.1 .
    BC164496 mRNA. Translation: AAI64496.1 .
    EF107698 mRNA. Translation: ABO30989.1 .
    RefSeqi NP_001071006.1. NM_001077538.1.
    XP_005161237.1. XM_005161180.1.
    XP_005161238.1. XM_005161181.1.
    XP_005161239.1. XM_005161182.1.
    UniGenei Dr.91877.

    3D structure databases

    ModBasei Search...

    Protein family/group databases

    CAZyi GH33. Glycoside Hydrolase Family 33.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000081184 ; ENSDARP00000075627 ; ENSDARG00000058327 .
    ENSDART00000084600 ; ENSDARP00000079035 ; ENSDARG00000058327 .
    GeneIDi 555206.
    KEGGi dre:555206.

    Organism-specific databases

    CTDi 555206.
    ZFINi ZDB-GENE-061103-511. neu3.3.

    Phylogenomic databases

    eggNOGi NOG84455.
    GeneTreei ENSGT00390000011171.
    HOGENOMi HOG000233778.
    HOVERGENi HBG052608.
    InParanoidi A0JMM3.
    KOi K12357.
    OMAi RECEEIA.
    OrthoDBi EOG7MSMNP.
    TreeFami TF331063.

    Enzyme and pathway databases

    Reactomei REACT_221391. Glycosphingolipid metabolism.
    REACT_221720. Sialic acid metabolism.

    Miscellaneous databases

    NextBioi 20880852.

    Family and domain databases

    Gene3Di 2.120.10.10. 1 hit.
    InterProi IPR026944. Sialidase-3.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF7. PTHR10628:SF7. 1 hit.
    SUPFAMi SSF50939. SSF50939. 1 hit.
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: WholeImported.
    2. "Molecular cloning and biochemical characterization of sialidases from zebrafish (Danio rerio)."
      Manzoni M., Colombi P., Papini N., Rubaga L., Tiso N., Preti A., Venerando B., Tettamanti G., Bresciani R., Argenton F., Borsani G., Monti E.
      Biochem. J. 408:395-406(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    3. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: PCR rescueImported.
    4. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    5. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiA0JMM3_DANRE
    AccessioniPrimary (citable) accession number: A0JMM3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 12, 2006
    Last sequence update: December 12, 2006
    Last modified: September 3, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    External Data

    Dasty 3

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