A0FDP4 (A0FDP4_SACKO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Hox 5 EMBL ABK00019.1
Organism	Saccoglossus kowalevskii (Acorn worm) EMBL ABK00019.1
Taxonomic identifier	10224 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Hemichordata › Enteropneusta › Harrimaniidae › Saccoglossus

Protein attributes

Sequence length	243 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Nucleus By similarity RuleBase RU004442.
Sequence similarities	Belongs to the Antp homeobox family. RuleBase RU004442 Contains 1 homeobox DNA-binding domain. SAAS SAAS017995

Ontologies

Keywords
Cellular component	Nucleus RuleBase RU004442 SAAS SAAS017995
Domain	Homeobox SAAS SAAS017995 RuleBase RU004442
Ligand	DNA-binding RuleBase RU004442 SAAS SAAS017995
Molecular function	Developmental protein SAAS SAAS017995
Gene Ontology (GO)
Biological_process	multicellular organismal development Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro transcription regulatory region sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0FDP4 [UniParc]. Last modified November 28, 2006. Version 1. Checksum: CB640FE686FD1067	FASTA	243	27,308
	10 20 30 40 50 60 MSSYFVNSSL TSRYQNGQDF QVQHYNTTGR YNPAPAAAAV NYNTGYQYSN HHDASYYPSD 70 80 90 100 110 120 ATTALLQPQQ PTTTNRLSHT PSSHPSYSLT GNLENVTMSA NSTSSPSPNS DSSLCSGVHG 130 140 150 160 170 180 KEKIGTGSTQ DGVYPWMRRM HMSSGTNGME AKRSRTAYTR YQTLELEKEF HFNRYLTRRR 190 200 210 220 230 240 RIEIAHALGL SERQIKIWFQ NRRMKWKKEH NVKSISQIMN PDTKDNSCET GGLSATGSVS PTN

References

[1]	"Hox gene expression in the hemichordate Saccoglossus kowalevskii and the evolution of deuterostome nervous systems." Aronowicz J., Lowe C.J. Integr. Comp. Biol. 46:890-901(2006) Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DQ985448 mRNA. Translation: ABK00019.1.
RefSeq	NP_001158410.1. NM_001164938.1.
3D structure databases
ProteinModelPortal	A0FDP4.
SMR	A0FDP4. Positions 133-210.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100303538.
Organism-specific databases
CTD	445674.
Family and domain databases
Gene3D	1.10.10.60. 1 hit.
InterPro	IPR017995. Homeobox_antennapedia. IPR001827. Homeobox_Antennapedia_CS. IPR017970. Homeobox_CS. IPR020479. Homeobox_metazoa. IPR001356. Homeodomain. IPR009057. Homeodomain-like. IPR000047. HTH_motif. [Graphical view]
Pfam	PF00046. Homeobox. 1 hit. [Graphical view]
PRINTS	PR00025. ANTENNAPEDIA. PR00024. HOMEOBOX. PR00031. HTHREPRESSR.
SMART	SM00389. HOX. 1 hit. [Graphical view]
SUPFAM	SSF46689. Homeodomain_like. 1 hit.
PROSITE	PS00032. ANTENNAPEDIA. 1 hit. PS00027. HOMEOBOX_1. 1 hit. PS50071. HOMEOBOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0FDP4_SACKO

Accession

Primary (citable) accession number: A0FDP4

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2006
Last sequence update:	November 28, 2006
Last modified:	March 6, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)