A0EFI6 (A0EFI6_PARTE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu RuleBase RU004061

Gene names

ORF Names:

GSPATT00026400001 EMBL CAK94077.1

Organism

Paramecium tetraurelia [Reference proteome]

Taxonomic identifier

5888 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Alveolata › Ciliophora › Intramacronucleata › Oligohymenophorea › Peniculida › Parameciidae › Paramecium

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325

Ontologies

Keywords
Biological process	Protein biosynthesis
Ligand	GTP-binding RuleBase RU000323 Nucleotide-binding
Molecular function	Elongation factor RuleBase RU000325
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0EFI6 [UniParc]. Last modified November 28, 2006. Version 1. Checksum: AD4A0BD37A4E08A0	FASTA	471	51,450
	10 20 30 40 50 60 MLHTLRSIQA PFTLNNTARA LFAKFVRDKP HLNVGTIGHI DHGKTTLTSA ITKVLAKQQL 70 80 90 100 110 120 AEFQEYGKID KAPEEKARGI TINSATVEYQ TKTRHYGHVD CPGHIDYVKN MITGAAKMDA 130 140 150 160 170 180 AILVVAATDG CMAQTREHVL LCRQVGVETI IVFVNKIDLA KDPEIHELVE MEIRELLSKY 190 200 210 220 230 240 EYDGDNAKIV KGSALLASND QEPELGEKSI LQLLETMDKE IKIPQRPIDK PFLMSIEGTY 250 260 270 280 290 300 HIAGRGTVVT GTIDQGKASI KDNIEVVGYG KPKQTAIVGV ETFKKQLDFG EAGDNVGILI 310 320 330 340 350 360 RGLTRDDVRR GQVLCKPGSL TTHNCIESNL YILKEEEGGR KKPFPNGYRP QMFVRTADVA 370 380 390 400 410 420 VTLYRYARRY LHCKLNLSYN LPLYQGQRFA LREGGKTVAA GVISKILPDE VAPTSKKQIL 430 440 450 460 470 DKQEAAEKKQ KEADDSKAAA AAKTAAAAAK PAAGAKAAGG AKPAAKAPPK K

References

[1]

"Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia." Genoscope Aury J.-M., Jaillon O., Duret L., Noel B., Jubin C., Porcel B.M., Segurens B., Daubin V., Anthouard V., Aiach N., Arnaiz O., Billaut A., Beisson J., Blanc I., Bouhouche K., Camara F., Duharcourt S., Guigo R. , Gogendeau D., Katinka M., Keller A.-M., Kissmehl R., Klotz C., Koll F., Le Mouel A., Lepere G., Malinsky S., Nowacki M., Nowak J.K., Plattner H., Poulain J., Ruiz F., Serrano V., Zagulski M., Dessen P., Betermier M., Weissenbach J., Scarpelli C., Schaechter V., Sperling L., Meyer E., Cohen J., Wincker P. Nature 444:171-178(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Stock d4-2 EMBL CAK94077.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CT868675 Genomic DNA. Translation: CAK94077.1.
RefSeq	XP_001461450.1. XM_001461413.1.
UniGene	Pte.18689.
3D structure databases
ProteinModelPortal	A0EFI6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5047235.
KEGG	ptm:GSPATT00026400001.
Phylogenomic databases
KO	K02358.
ProtClustDB	CLSZ2433238.
Family and domain databases
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
PANTHER	PTHR23115:SF31. PTHR23115:SF31. 1 hit.
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0EFI6_PARTE

Accession

Primary (citable) accession number: A0EFI6

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2006
Last sequence update:	November 28, 2006
Last modified:	January 9, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)