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A0EC59

- A0EC59_PARTE

UniProt

A0EC59 - A0EC59_PARTE

Protein
Submitted name:

Chromosome undetermined scaffold_89, whole genome shotgun sequence

Gene

GSPATT00025612001

Organism
Paramecium tetraurelia
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (28 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chromosome undetermined scaffold_89, whole genome shotgun sequenceImported
    Gene namesi
    ORF Names:GSPATT00025612001Imported
    OrganismiParamecium tetraureliaImported
    Taxonomic identifieri5888 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
    ProteomesiUP000000600: Partially assembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliA0EC59.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.20.140.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR008893. WGR_domain.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    PF05406. WGR. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0EC59-1 [UniParc]FASTAAdd to Basket

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    MKKYLQCDSK FWSITIEEND ETKLFIRYGN LCDYEELNVK KVEKQFPSKE    50
    ECQKYCEEAS KTKEDKGYQE VVPGQQIQQQ IQKNDSPIQN RPVQTKQQQK 100
    QSNAIKRTGS LKPDTIAAIT DDALNGRQQA IKGPAVDLGK GTIPLGKVML 150
    AQTWNEEIDP KGYYLSEKLD GMRMIWTGSK MYSRNGNPIQ FPDFFVQGWP 200
    KSYLDGELWL ERDQFSKLVS ITKRQVPVED DWRKVKYMVF DAPGLKLPFK 250
    DRYLRFKQAC EQANQYIVYV PHIVCKGYDH LIDELEAVQD LEGEGLMLRD 300
    PDSTYEQRRS DKLLKVKTFM DDEATVLAHE EGTGRCQGML GSLKVKNTSG 350
    IVFNIGSGLT DDIRQKPPKI GSRITYKYYG VSKNNVPRFP IYLRERPKE 399
    Length:399
    Mass (Da):46,077
    Last modified:November 28, 2006 - v1
    Checksum:iB841A16EAC849173
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT868670 Genomic DNA. Translation: CAK92876.1.
    RefSeqiXP_001460273.1. XM_001460236.1.

    Genome annotation databases

    EnsemblProtistsiCAK92876; CAK92876; GSPATT00025612001.
    GeneIDi5046058.
    KEGGiptm:GSPATT00025612001.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT868670 Genomic DNA. Translation: CAK92876.1 .
    RefSeqi XP_001460273.1. XM_001460236.1.

    3D structure databases

    ProteinModelPortali A0EC59.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi CAK92876 ; CAK92876 ; GSPATT00025612001 .
    GeneIDi 5046058.
    KEGGi ptm:GSPATT00025612001.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.20.140.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    IPR008893. WGR_domain.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    PF05406. WGR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Stock d4-2Imported.

    Entry informationi

    Entry nameiA0EC59_PARTE
    AccessioniPrimary (citable) accession number: A0EC59
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2006
    Last sequence update: November 28, 2006
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3