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A0EA99

- A0EA99_PARTE

UniProt

A0EA99 - A0EA99_PARTE

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Protein
Submitted name: Chromosome undetermined scaffold_86, whole genome shotgun sequence
Gene
GSPATT00024948001
Organism
Paramecium tetraurelia
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
  3. DNA replication Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome undetermined scaffold_86, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSPATT00024948001Imported
OrganismiParamecium tetraurelia
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600: Partially assembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliA0EA99.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0EA99-1 [UniParc]FASTAAdd to Basket

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MQKTIASFFK SSKKGDDSND QIKEQQFIEE NLKKEKLMPE QKVCASKSKS    50
HNMEIKGAVL FIDMAELYEQ VGEIKGQNSK DAIKELVAKL FIRIMKENRE 100
EFVPAYLFSI LKLGPDYESW ELGIGQGIIV KSISAVSGKS EKQVRELMNT 150
LGDLGLAIEK SKSTQTSLNK FFVSQSVKEE VKLTMIQVFN TLQQLQKQEG 200
TGSSLEKERI LTGLLRMAKP IEAKYIIRFI EKNLKIGAAE KTMQAALARA 250
FQLYHKGNVE GDYESIINQA LCECPNYKKI IDTLFSIQSL KEVPELCHII 300
PGVPCKPMLA KPMKSIQMIF QRFENMKFTC EYKYDGLRGQ IHFENGQVSI 350
FSRNLENMTQ TYPDIVNYVH THYQHLDGFI IDSEIVAYDV ANNRILPFQT 400
LTSRAKKNVD QNQIEIQVCL YIFDLLYLNK QSYLKETLEK RRQTLRETFK 450
EEEGKLKFAT SRDSENFEEI EEFLLNSIKM GCEGLMIKTL EINSQYEPAK 500
RSFNWLKLKK DYLDNGLSDT FDLVPIGACY GTGKRKGFYG SYLLACYNED 550
MDQYETTCKI GTGFSDENLE KFFQFFQEYL IPHPLSEYKC DGVNMDVWFS 600
PVVVWEIKSA DIQISPIYSA CSTILQLNNK GVGLRFPRLI KVREDKKPNE 650
ATSSQFLYDV YKQQAVVASN NTFEQDDDFY 680
Length:680
Mass (Da):78,311
Last modified:November 28, 2006 - v1
Checksum:iE1CB7825FDEB2625
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT868667 Genomic DNA. Translation: CAK92216.1.
RefSeqiXP_001459613.1. XM_001459576.1.

Genome annotation databases

EnsemblProtistsiCAK92216; CAK92216; GSPATT00024948001.
GeneIDi5045391.
KEGGiptm:GSPATT00024948001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT868667 Genomic DNA. Translation: CAK92216.1 .
RefSeqi XP_001459613.1. XM_001459576.1.

3D structure databases

ProteinModelPortali A0EA99.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi CAK92216 ; CAK92216 ; GSPATT00024948001 .
GeneIDi 5045391.
KEGGi ptm:GSPATT00024948001.

Phylogenomic databases

KOi K10747.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2Imported.

Entry informationi

Entry nameiA0EA99_PARTE
AccessioniPrimary (citable) accession number: A0EA99
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: May 14, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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