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A0EA99

- A0EA99_PARTE

UniProt

A0EA99 - A0EA99_PARTE

Protein
Submitted name:

Chromosome undetermined scaffold_86, whole genome shotgun sequence

Gene

GSPATT00024948001

Organism
Paramecium tetraurelia
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (28 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro
    3. DNA replication Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Chromosome undetermined scaffold_86, whole genome shotgun sequenceImported
    Gene namesi
    ORF Names:GSPATT00024948001Imported
    OrganismiParamecium tetraureliaImported
    Taxonomic identifieri5888 [NCBI]
    Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
    ProteomesiUP000000600: Partially assembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliA0EA99.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0EA99-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQKTIASFFK SSKKGDDSND QIKEQQFIEE NLKKEKLMPE QKVCASKSKS    50
    HNMEIKGAVL FIDMAELYEQ VGEIKGQNSK DAIKELVAKL FIRIMKENRE 100
    EFVPAYLFSI LKLGPDYESW ELGIGQGIIV KSISAVSGKS EKQVRELMNT 150
    LGDLGLAIEK SKSTQTSLNK FFVSQSVKEE VKLTMIQVFN TLQQLQKQEG 200
    TGSSLEKERI LTGLLRMAKP IEAKYIIRFI EKNLKIGAAE KTMQAALARA 250
    FQLYHKGNVE GDYESIINQA LCECPNYKKI IDTLFSIQSL KEVPELCHII 300
    PGVPCKPMLA KPMKSIQMIF QRFENMKFTC EYKYDGLRGQ IHFENGQVSI 350
    FSRNLENMTQ TYPDIVNYVH THYQHLDGFI IDSEIVAYDV ANNRILPFQT 400
    LTSRAKKNVD QNQIEIQVCL YIFDLLYLNK QSYLKETLEK RRQTLRETFK 450
    EEEGKLKFAT SRDSENFEEI EEFLLNSIKM GCEGLMIKTL EINSQYEPAK 500
    RSFNWLKLKK DYLDNGLSDT FDLVPIGACY GTGKRKGFYG SYLLACYNED 550
    MDQYETTCKI GTGFSDENLE KFFQFFQEYL IPHPLSEYKC DGVNMDVWFS 600
    PVVVWEIKSA DIQISPIYSA CSTILQLNNK GVGLRFPRLI KVREDKKPNE 650
    ATSSQFLYDV YKQQAVVASN NTFEQDDDFY 680
    Length:680
    Mass (Da):78,311
    Last modified:November 28, 2006 - v1
    Checksum:iE1CB7825FDEB2625
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT868667 Genomic DNA. Translation: CAK92216.1.
    RefSeqiXP_001459613.1. XM_001459576.1.

    Genome annotation databases

    EnsemblProtistsiCAK92216; CAK92216; GSPATT00024948001.
    GeneIDi5045391.
    KEGGiptm:GSPATT00024948001.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT868667 Genomic DNA. Translation: CAK92216.1 .
    RefSeqi XP_001459613.1. XM_001459576.1.

    3D structure databases

    ProteinModelPortali A0EA99.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblProtistsi CAK92216 ; CAK92216 ; GSPATT00024948001 .
    GeneIDi 5045391.
    KEGGi ptm:GSPATT00024948001.

    Phylogenomic databases

    KOi K10747.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Stock d4-2Imported.

    Entry informationi

    Entry nameiA0EA99_PARTE
    AccessioniPrimary (citable) accession number: A0EA99
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2006
    Last sequence update: November 28, 2006
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3