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Protein
Submitted name:

Chromosome undetermined scaffold_26, whole genome shotgun sequence

Gene

GSPATT00010141001

Organism
Paramecium tetraurelia
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

  1. double-strand break repair via homologous recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome undetermined scaffold_26, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSPATT00010141001Imported
OrganismiParamecium tetraureliaImported
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600: Partially assembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiA0CSV2.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR015187. BRCA2_OB_1.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF09103. BRCA-2_OB1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

A0CSV2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MISGFQTGKN QKIQLVENEK YNKIIIQFED LSEEEEISNS ENKPTKNDLN
60 70 80 90 100
LLNSLSKEAI KINNQLYHPS KFAEQGFKFL SKTPRDSLSE KKISYQTVIM
110 120 130 140 150
ADEIKKEIIT PIKKKEPNNY NEIFQMNAIL LSKISKLPKC LIGEKFCELS
160 170 180 190 200
KQLMKNSVLK QSSFCRLQII PENLDWKLIK EYFKQYDVEK DWLFQQAKLI
210 220 230 240 250
FWKLQSKNNY TDQKIILELE YRYFIQYRLQ SRTIIQEIWT NDQSLNQHMI
260 270 280 290 300
LLVVGVEQCQ SRRILELSDG WYSLFFVCEQ SFDQIYNRIK IGQKLHVTNL
310 320 330 340 350
KEYPIIFNTS NVKIITQYPF TKLLVTTKIN SIKKAQINSK LGKQQQKYFI
360 370 380 390 400
RSLKSLRNGT IPCIDVFIVS KSYLIKVNQK NQRKALLFNS ETENEEELQQ
410 420 430 440 450
LRNSNLCFWI TVMDSLNYFD ERKSKITELK DIIVYINDPL QYEAISVGQR
460 470 480 490 500
VQIINSIQFN QEISVKITKS SGFQFELQQY QDYFNKLQFV SNRCDMQIRV
510 520 530 540 550
NNHTKFELID VIEGSNDQNQ NVKIEIQNTF FGEILKHQQM KILKMTQLNK
560 570
INNERFQTTQ MSKLINIINY NK
Length:572
Mass (Da):67,825
Last modified:November 28, 2006 - v1
Checksum:i37868F5A3263901C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT868163 Genomic DNA. Translation: CAK73869.1.
RefSeqiXP_001441266.1. XM_001441229.1.

Genome annotation databases

EnsemblProtistsiCAK73869; CAK73869; GSPATT00010141001.
GeneIDi5027051.
KEGGiptm:GSPATT00010141001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT868163 Genomic DNA. Translation: CAK73869.1.
RefSeqiXP_001441266.1. XM_001441229.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAK73869; CAK73869; GSPATT00010141001.
GeneIDi5027051.
KEGGiptm:GSPATT00010141001.

Phylogenomic databases

InParanoidiA0CSV2.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR015187. BRCA2_OB_1.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF09103. BRCA-2_OB1. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2Imported.

Entry informationi

Entry nameiA0CSV2_PARTE
AccessioniPrimary (citable) accession number: A0CSV2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: January 7, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.