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A0C993

- A0C993_PARTE

UniProt

A0C993 - A0C993_PARTE

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Protein

Histone deacetylase

Gene

GSPATT00006666001

Organism
Paramecium tetraurelia
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone.UniRule annotation

GO - Molecular functioni

  1. NAD-dependent histone deacetylase activity (H3-K14 specific) Source: UniProtKB-EC
  2. NAD-dependent histone deacetylase activity (H3-K18 specific) Source: UniProtKB-EC
  3. NAD-dependent histone deacetylase activity (H3-K9 specific) Source: UniProtKB-EC
  4. NAD-dependent histone deacetylase activity (H4-K16 specific) Source: UniProtKB-EC

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Chromatin regulatorUniRule annotation, HydrolaseUniRule annotationSAAS annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Histone deacetylaseUniRule annotation (EC:3.5.1.98UniRule annotation)
Gene namesi
ORF Names:GSPATT00006666001Imported
OrganismiParamecium tetraureliaImported
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600: Partially assembled WGS sequence

Subcellular locationi

Nucleus UniRule annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA0C993.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the histone deacetylase family. HD Type 1 subfamily.UniRule annotation

Phylogenomic databases

InParanoidiA0C993.
KOiK06067.

Family and domain databases

Gene3Di3.40.800.20. 1 hit.
InterProiIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERiPTHR10625. PTHR10625. 1 hit.
PfamiPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFiPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSiPR01270. HDASUPER.
PR01271. HISDACETLASE.

Sequencei

Sequence statusi: Complete.

A0C993-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNLFKQKVTY YYDEEFGTFN YSTTHPMKPL RVAITDDLVG HYGLKQYMNC
60 70 80 90 100
IVRCINLVDE DVLTQFHSEE YINLIKIITP ENKCQHEDQL YRFNFMEDCP
110 120 130 140 150
VLDRLFDFCL CQTSGSVGAA CVIADQKSNI AINWSGGLHH AKQSEASGFC
160 170 180 190 200
YVNDCVLGIL ELLKTYQRVL YIDIDIHHGD GVEEAFYLTD RVMTCSFHKF
210 220 230 240 250
KEYFPGTGHI DDIGHDKGKY YAVNFPLNEG LNDDSIQLIF KPVIDSIMEN
260 270 280 290 300
FRPDVVMLQG GTDSLSGDRL GCFNLSIKGH GSCTEYLKKF NVPIIMVGGG
310 320 330 340 350
GYTLRNVPRC WTYETSLALN VPIPDNIPDE SDYKIYFGPE YKLHLPISNM
360 370 380 390 400
EEQNSKEYLE KNISQRIQNK FEPGCAQIDH YAIGKESRQK IDYQELFSSY
410
NDKREEMQLE QNQDQQE
Length:417
Mass (Da):48,016
Last modified:November 28, 2006 - v1
Checksum:i99A8C2AE48F42DA9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT868052 Genomic DNA. Translation: CAK67360.1.
RefSeqiXP_001434757.1. XM_001434720.1.

Genome annotation databases

EnsemblProtistsiCAK67360; CAK67360; GSPATT00006666001.
GeneIDi5020542.
KEGGiptm:GSPATT00006666001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT868052 Genomic DNA. Translation: CAK67360.1 .
RefSeqi XP_001434757.1. XM_001434720.1.

3D structure databases

ProteinModelPortali A0C993.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi CAK67360 ; CAK67360 ; GSPATT00006666001 .
GeneIDi 5020542.
KEGGi ptm:GSPATT00006666001.

Phylogenomic databases

InParanoidi A0C993.
KOi K06067.

Family and domain databases

Gene3Di 3.40.800.20. 1 hit.
InterProi IPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view ]
PANTHERi PTHR10625. PTHR10625. 1 hit.
Pfami PF00850. Hist_deacetyl. 1 hit.
[Graphical view ]
PIRSFi PIRSF037913. His_deacetylse_1. 1 hit.
PRINTSi PR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2Imported.

Entry informationi

Entry nameiA0C993_PARTE
AccessioniPrimary (citable) accession number: A0C993
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: October 29, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3