Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Chromosome undetermined scaffold_16, whole genome shotgun sequence

Gene

GSPATT00006583001

Organism
Paramecium tetraurelia
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome undetermined scaffold_16, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSPATT00006583001Imported
OrganismiParamecium tetraureliaImported
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600: Partially assembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiA0C910.
KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0C910-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRFIGRNLN RYNFSELQKF GNSFLAGSNA EYLDNLLDKW SQDPNSVPAT
60 70 80 90 100
WDAYFRQVCE SNKFDFTPEP SKGQTISFQA DVFLHVNSKQ VSGVRKLLSD
110 120 130 140 150
HFRVRLLINK YRHRGHEKSM VDPLDLEHIQ QIGKVKGYTK LDYREYFTEE
160 170 180 190 200
DLDREFYIHD EVSSGISKEK QLMKLRDLIN YLEKAYCGKI SYEYMHIQST
210 220 230 240 250
EERDWIREQI EKFEEFLPSK EQKLKTFERL GQEHAFSTFL QKKFNTSKRF
260 270 280 290 300
GIEGCDSMIS GLQALVDSAA QAGVEYIVFG MAHRGRLNTL YNVFQKSAEE
310 320 330 340 350
IMVEFQDLKG IYNEDIWGNS GDVKYHLGSV HNVKFGEKKL RLEMLPNPSH
360 370 380 390 400
LETVDPCVYG KVRAIQDYHK DRNGDKAFGV LIHGDAAVAG QGIVYESLQM
410 420 430 440 450
ADLEGYKSGG IIHIVSNNQI GFTTVPKDSR SGLYCTDIAH AIQAPVIHVN
460 470 480 490 500
ADEPELVDKV FQVATLYRTK FKRDIFIDLV GYRRYGHNEQ DQPKFTQPIM
510 520 530 540 550
YDKIEKTPPV FVKFAEKLIA QEIVTKAEVD QLMKKHEDNL EVAYQKSRKM
560 570 580 590 600
DYNLKDWQPV PWEMIKVPTL WGRIKDTGVP INILKQIGDK INTIPSDFNA
610 620 630 640 650
HPQIRKFYEE RLNSIQKDQG VDFATAEALA FGTLLHEGFN VRLSGEDVQR
660 670 680 690 700
ATFSHRHAVI HDQKNPNGPS FVPLHAVIPK GQENDRLSIY NSHLSEYGVL
710 720 730 740 750
GFEYGYSITN PNALVLWEGQ FGDFANGAQI IIDNYIASAE SKWDVDSGLV
760 770 780 790 800
MLLPNGMDGQ GPEHSSGRVE RFLQLSDDDP AVFERNLGVR LKRQMRNSNM
810 820 830 840 850
QIVQCTTPAN YFHSLRRQLR RDFRKPLIAM TSKKLLRLQA AKSKLNEFSE
860 870 880 890 900
QARFSQIYDD PFPELIDEPS QILRVILCSG QVYYDILKKR EDLKVKNTAI
910 920 930 940 950
VRIEQLAPFP YEFLQAVIQK YKKAHFIWVQ EEHQNYGPWF FVRPRIQSVI
960 970 980 990
SKTQGLIQQQ IQYIGRKPSG SPATGFHQLH EKEVQAFLTK AFEF
Length:994
Mass (Da):114,668
Last modified:November 28, 2006 - v1
Checksum:iF10AB881210FB3F7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT868052 Genomic DNA. Translation: CAK67277.1.
RefSeqiXP_001434674.1. XM_001434637.1.

Genome annotation databases

EnsemblProtistsiCAK67277; CAK67277; GSPATT00006583001.
GeneIDi5020459.
KEGGiptm:GSPATT00006583001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT868052 Genomic DNA. Translation: CAK67277.1.
RefSeqiXP_001434674.1. XM_001434637.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAK67277; CAK67277; GSPATT00006583001.
GeneIDi5020459.
KEGGiptm:GSPATT00006583001.

Phylogenomic databases

InParanoidiA0C910.
KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2Imported.

Entry informationi

Entry nameiA0C910_PARTE
AccessioniPrimary (citable) accession number: A0C910
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: January 7, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.