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Protein
Submitted name:

Chromosome undetermined scaffold_106, whole genome shotgun sequence

Gene

GSPATT00028747001

Organism
Paramecium tetraurelia
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome undetermined scaffold_106, whole genome shotgun sequenceImported
Gene namesi
ORF Names:GSPATT00028747001Imported
OrganismiParamecium tetraureliaImported
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi412030.XP_001425110.1.

Structurei

3D structure databases

ProteinModelPortaliA0BGP5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

InParanoidiA0BGP5.
KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.

Sequencei

Sequence statusi: Complete.

A0BGP5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIFKNSKFF FGTLKAHTLP ALKYGYSDLE PVLSATLLEF HHSKHHQAYI
60 70 80 90 100
NNLNAAQEQL EDALTKNDVQ KIATLQGTIK FNLGGHLNHS VVLGELDPNQ
110 120 130 140 150
EWRRTITSWK QCSSLRNQQK LGKTAAIQGS GWGFLGVDQQ SKKLRYLELP
160 170 180 190 200
NQEIPQNYGL TPILTIDVWE HAYWWDYKNV RPNFLANVWK IVNWKDVEAR

YNQAQK
Length:206
Mass (Da):23,835
Last modified:November 28, 2006 - v1
Checksum:i9CA84CB9543FB4F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT867993 Genomic DNA. Translation: CAK57712.1.
RefSeqiXP_001425110.1. XM_001425073.1.
UniGeneiPte.1012.

Genome annotation databases

EnsemblProtistsiCAK57712; CAK57712; GSPATT00028747001.
GeneIDi5010894.
KEGGiptm:GSPATT00028747001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT867993 Genomic DNA. Translation: CAK57712.1.
RefSeqiXP_001425110.1. XM_001425073.1.
UniGeneiPte.1012.

3D structure databases

ProteinModelPortaliA0BGP5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi412030.XP_001425110.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblProtistsiCAK57712; CAK57712; GSPATT00028747001.
GeneIDi5010894.
KEGGiptm:GSPATT00028747001.

Phylogenomic databases

InParanoidiA0BGP5.
KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2Imported.

Entry informationi

Entry nameiA0BGP5_PARTE
AccessioniPrimary (citable) accession number: A0BGP5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: June 24, 2015
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.