A0B9D4 (A0B9D4_METTP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Arginine decarboxylase RuleBase RU003740
EC=4.1.1.19 RuleBase RU003740

Gene names

Ordered Locus Names:

Mthe_1536

Organism

Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix thermophila (strain DSM 6194 / PT)) [Complete proteome] [HAMAP]

Taxonomic identifier

349307 [NCBI]

Taxonomic lineage

Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosaetaceae › Methanosaeta

Protein attributes

Sequence length	643 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-arginine = agmatine + CO2. RuleBase RU003740
Cofactor	Magnesium By similarity. RuleBase RU003740
Sequence similarities	Belongs to the Orn/Lys/Arg decarboxylase class-II family. RuleBase RU003737

Ontologies

Keywords
Biological process	Spermidine biosynthesis RuleBase RU003740
Molecular function	Decarboxylase RuleBase RU003740 Lyase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	arginine catabolic process Inferred from electronic annotation. Source: InterPro spermidine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	arginine decarboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0B9D4 [UniParc]. Last modified November 28, 2006. Version 1. Checksum: 9BAA7167253F8289	FASTA	643	73,007
	10 20 30 40 50 60 MWKVDDSIAL YGIHGWGDGY FSINEKGNVV VMPNKSSDSC VDVMDVIRRL ETSGENLPVL 70 80 90 100 110 120 LRFPQIIEHR IWEIYRAFTG SISEFGYQGK YQPVFPMKVN QRKEVIEYIL NYGREINIGL 130 140 150 160 170 180 EIGTKAELLA ALTLDLPEDS LLICNGYKDD DFLRLALMFS DKHKIIIVVD LFEEIFDILR 190 200 210 220 230 240 LARSMEVRPL LGMRVKLFSK GSGRWAESGG ESAKFGLSTI ECLELLKILE ENGLLDRLRM 250 260 270 280 290 300 IHFHIGSQIT DIHRIKHAMN EAARIYAKVR KVAEIEYFNV GGGLSVDYDG SKSSGPSSAN 310 320 330 340 350 360 YTLREYSNDI VYTLQKICEE EGVPCPTIVS ESGRAIAAYH SFLVFKIIGK KNSKDGFVAF 370 380 390 400 410 420 PLEGDPIQIE DLYFAFKNIN LKNYKEYYHD ALHYRDELLD SFNLGNIGLE ERAKGEMLFW 430 440 450 460 470 480 MVCQKAVSLA RHAGDNSEEF RELKKLVGQK YIGNFSLFQS VPDMWGVGQI FPIMPLHRLR 490 500 510 520 530 540 EVPSECGTIA DITCDSDGEI KSFAGGKEAI ELHKLSRSED YYMGIFLLGA YQDTLGDFHN 550 560 570 580 590 600 LLGCVTEVHV LVEGRSWRIS RRIPGDTCEK LLKFFNYDTE AYLQRLGERC ATEPQLEAVL 610 620 630 640 EEVRRALSTT TYFNSPCLAS ETDEDKELLN SAAHRVMIET GRI

References

[1]

"Complete sequence of Methanosaeta thermophila PT." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., Smith K.S., Ingram-Smith C., Richardson P. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 6194 / PT.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000477 Genomic DNA. Translation: ABK15308.1.
RefSeq	YP_843948.1. NC_008553.1.
3D structure databases
ProteinModelPortal	A0B9D4.
ModBase	Search...
Protein-protein interaction databases
STRING	A0B9D4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4461723.
GenomeReviews	Gene locus Mthe_1536 in contig CP000477_GR.
KEGG	mtp:Mthe_1536.
NMPDR	fig|349307.7.peg.1597.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	arNOG18029.
HOGENOM	HBG321436.
OMA	LICNGYK.
PhylomeDB	A0B9D4.
ProtClustDB	PRK05354.
Family and domain databases
InterPro	IPR009006. Ala_racemase/Decarboxylase_C. IPR002985. Arg_decrbxlase. IPR022643. De-COase2_C. IPR022644. De-COase2_N. IPR022653. De-COase2_pyr-phos_BS. IPR000183. Orn/DAP/Arg_de-COase. [Graphical view]
Gene3D	G3DSA:2.40.37.10. Ala_racemase/Decarboxylase_C. 2 hits.
KO	K01585.
PANTHER	PTHR11482:SF3. Arg_decrbxlase. 1 hit.
Pfam	PF02784. Orn_Arg_deC_N. 1 hit. PF00278. Orn_DAP_Arg_deC. 1 hit. [Graphical view]
PIRSF	PIRSF001336. Arg_decrbxlase. 1 hit.
PRINTS	PR01180. ARGDCRBXLASE. PR01179. ODADCRBXLASE.
TIGRFAMs	TIGR01273. SpeA. 1 hit.
PROSITE	PS00878. ODR_DC_2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0B9D4_METTP

Accession

Primary (citable) accession number: A0B9D4

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2006
Last sequence update:	November 28, 2006
Last modified:	November 16, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)