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Protein

30S ribosomal protein S8e

Gene

rps8e

Organism
Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) (Methanothrix thermophila)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8eUniRule annotation
Gene namesi
Name:rps8eUniRule annotation
Ordered Locus Names:Mthe_1293
OrganismiMethanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) (Methanothrix thermophila)
Taxonomic identifieri349307 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosaetaceaeMethanosaeta
Proteomesi
  • UP000000674 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003041731 – 12730S ribosomal protein S8eAdd BLAST127

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi349307.Mthe_1293.

Structurei

3D structure databases

ProteinModelPortaliA0B8P7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8e family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0B8P7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKWQGKSARK PTGGRLVPAR GKRKYELGRE PAETLVGPIR VKKIRTRGGN
60 70 80 90 100
QKLRLLKADV ASVSDPVTGA TKLVKIETVV DNPANRHYVR RNIITRGAVI
110 120
RTEIGEARVL SRPGQDGVVN AVLLPKH
Length:127
Mass (Da):13,960
Last modified:November 28, 2006 - v1
Checksum:i6FF4F4E53B35A7FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000477 Genomic DNA. Translation: ABK15071.1.

Genome annotation databases

EnsemblBacteriaiABK15071; ABK15071; Mthe_1293.
KEGGimtp:Mthe_1293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000477 Genomic DNA. Translation: ABK15071.1.

3D structure databases

ProteinModelPortaliA0B8P7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349307.Mthe_1293.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK15071; ABK15071; Mthe_1293.
KEGGimtp:Mthe_1293.

Phylogenomic databases

eggNOGiarCOG04154. Archaea.
COG2007. LUCA.
HOGENOMiHOG000108969.
KOiK02995.
OMAiNPNYVRR.

Family and domain databases

HAMAPiMF_00029. Ribosomal_S8e. 1 hit.
InterProiIPR020919. Ribosomal_protein_S8e_arc.
IPR001047. Ribosomal_S8e.
IPR022309. Ribosomal_S8e/biogenesis_NSA2.
IPR018283. Ribosomal_S8e_CS.
[Graphical view]
PANTHERiPTHR10394. PTHR10394. 1 hit.
PfamiPF01201. Ribosomal_S8e. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00307. eS8. 1 hit.
PROSITEiPS01193. RIBOSOMAL_S8E. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS8E_METTP
AccessioniPrimary (citable) accession number: A0B8P7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 11, 2007
Last sequence update: November 28, 2006
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.