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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mthe_0300

Organism
Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix thermophila (strain DSM 6194 / PT))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMMET349307:GHKI-305-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mthe_0300Imported
OrganismiMethanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix thermophila (strain DSM 6194 / PT))Imported
Taxonomic identifieri349307 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosaetaceaeMethanosaeta
ProteomesiUP000000674: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349307.Mthe_0300.

Structurei

3D structure databases

ProteinModelPortaliA0B5X1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

A0B5X1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNLSRAARSL GLPVERLESL MEGILKLSRW PEPRLLRFDK GTSGVEPGTV
60 70 80 90 100
IFENGDVVHG YPKIRRAMML GPAIRRNFID RVAVEEKMNG YNIRAVSVDG
110 120 130 140 150
DVYALTRGGY ICPFSTEIVR ERISPDLFED HPDIVLCGEM VGPENPYVPK
160 170 180 190 200
DVYPVESIDF YLFDISKKNC RSMMGVHATH ALAEEYSIKV VPFFGEFPVE
210 220 230 240 250
RAAEEIFRII KRLGRSGREG VVIKDPENRT SPLKYTASES NCSDLEFAFR
260 270 280 290 300
YYNDYAQDFF FSRVVREGFQ SVEWNEDEAA LRERALRLGE SILVPLTDTI
310 320 330 340 350
RRRMQGEQIM QQVQIRVRSI QTARDFEQHL RRMGTKAIFD IPEQDGDRYV
360 370
VRILKQVMST NDKTLAVIEG QPW
Length:373
Mass (Da):42,873
Last modified:November 28, 2006 - v1
Checksum:i0454BF959AD900DC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000477 Genomic DNA. Translation: ABK14095.1.
RefSeqiWP_011695494.1. NC_008553.1.
YP_842735.1. NC_008553.1.

Genome annotation databases

EnsemblBacteriaiABK14095; ABK14095; Mthe_0300.
GeneIDi4462812.
KEGGimtp:Mthe_0300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000477 Genomic DNA. Translation: ABK14095.1.
RefSeqiWP_011695494.1. NC_008553.1.
YP_842735.1. NC_008553.1.

3D structure databases

ProteinModelPortaliA0B5X1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349307.Mthe_0300.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABK14095; ABK14095; Mthe_0300.
GeneIDi4462812.
KEGGimtp:Mthe_0300.

Phylogenomic databases

eggNOGiCOG1423.
HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMMET349307:GHKI-305-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6194 / PTImported.

Entry informationi

Entry nameiA0B5X1_METTP
AccessioniPrimary (citable) accession number: A0B5X1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: February 4, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.