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A0B5D6 (A0B5D6_METTP) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Radical SAM domain protein EMBL ABK13910.1
Gene names
Ordered Locus Names:Mthe_0108
OrganismMethanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix thermophila (strain DSM 6194 / PT)) [Complete proteome] [HAMAP]
Taxonomic identifier349307 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosaetaceae › Methanosaeta

Protein attributes

Sequence length295 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

iron-sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0B5D6 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: 2E40A2E13F160243

FASTA29533,599
        10         20         30         40         50         60 
MRYIFGPVLS RRLGLSMGVD LLPLKTCSMD CCYCEIGATT CLTMRRDRYV PEEAVIREIS 

        70         80         90        100        110        120 
RVSSVDFDYL TFAGSGEPTL HSGLGEIIRA ARKQIDRPIA VITNSSLLIY KHVRKEVAQA 

       130        140        150        160        170        180 
DLVLPSLDAA TQETFERINR PAAGLKIEDI IEGLRAFRSE FGGEMWLEVM LVREINESDT 

       190        200        210        220        230        240 
PLIARAAAEI EPDRIQLNTV VRPPAEPVLP LRRDEMLRML RLFKGAELIP DWDWSVPEVE 

       250        260        270        280        290 
EERIADLLRE PMTLEELRSK SGLIYEDTVK YLKILEDAGR ISRSIRDGKI YFQTR

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References

[1]"Complete sequence of Methanosaeta thermophila PT."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., Smith K.S., Ingram-Smith C., Richardson P.
Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 6194 / PT.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000477 Genomic DNA. Translation: ABK13910.1.
RefSeqYP_842550.1. NC_008553.1.

3D structure databases

ProteinModelPortalA0B5D6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0B5D6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4462500.
GenomeReviewsGene locus Mthe_0108 in contig CP000477_GR.
KEGGmtp:Mthe_0108.
NMPDRfig|349307.7.peg.113.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGarNOG05934.
HOGENOMHBG463712.
OMAIDRPPAY.

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR006638. Elp3/MiaB/NifB.
IPR007197. rSAM.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PfamPF04055. Radical_SAM. 1 hit.
[Graphical view]
SMARTSM00729. Elp3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0B5D6_METTP
AccessionPrimary (citable) accession number: A0B5D6
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: October 19, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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