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A0B4W1

- A0B4W1_BURCH

UniProt

A0B4W1 - A0B4W1_BURCH

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Bcen2424_6876

Organism
Burkholderia cenocepacia (strain HI2424)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (28 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBCEN331272:GHR7-6961-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Bcen2424_6876Imported
    Encoded oniPlasmid pHI2424-1Imported
    OrganismiBurkholderia cenocepacia (strain HI2424)Imported
    Taxonomic identifieri331272 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000000776: Plasmid pHI2424-1

    Interactioni

    Protein-protein interaction databases

    STRINGi331272.Bcen2424_6876.

    Structurei

    3D structure databases

    ProteinModelPortaliA0B4W1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG6BW4VZ.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0B4W1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGRWTSERGI RARTPVARNG RMPEFIEPSL AVLAAEPPTS GEWGYEIKFD    50
    GYRMLARIDA GDVRIFTRNG HDWTARLPHL RSVLERLPVN RAWIDAEAVW 100
    FDTEGRPNFN GLQNAFDRRR TAGISLVVFD LMWLNNNDLR PWTWRERRAT 150
    LTKLVAEILG DEVRFSEAID ADPDAMLASA CALGLEGIMG KRVDAPYRSG 200
    RSDRWIKLKC SRRQEFVIGG FSRRKGATGG VRAVLLGVYE EGGQLRYVGH 250
    VAPRFAPRQA REFEDRLSSL GRQRSPFVRA PEPEADREFH WLKPELVAEV 300
    AFLEWTPTGQ LRHPSFRGLR ADKPARTVTR EDPLEVKRAR NSK 343
    Length:343
    Mass (Da):39,175
    Last modified:November 28, 2006 - v1
    Checksum:i50D49CBBD0F680A3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000461 Genomic DNA. Translation: ABK13605.1.
    RefSeqiWP_011695138.1. NC_008545.1.
    YP_840498.1. NC_008545.1.

    Genome annotation databases

    EnsemblBacteriaiABK13605; ABK13605; Bcen2424_6876.
    GeneIDi4454916.
    KEGGibch:Bcen2424_6876.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000461 Genomic DNA. Translation: ABK13605.1 .
    RefSeqi WP_011695138.1. NC_008545.1.
    YP_840498.1. NC_008545.1.

    3D structure databases

    ProteinModelPortali A0B4W1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 331272.Bcen2424_6876.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABK13605 ; ABK13605 ; Bcen2424_6876 .
    GeneIDi 4454916.
    KEGGi bch:Bcen2424_6876.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG6BW4VZ.

    Enzyme and pathway databases

    BioCyci BCEN331272:GHR7-6961-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of plasmid 1 of Burkholderia cenocepacia HI2424."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
      , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P.
      Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiA0B4W1_BURCH
    AccessioniPrimary (citable) accession number: A0B4W1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2006
    Last sequence update: November 28, 2006
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3