A0B4E1 (A0B4E1_BURCH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, TetR family EMBL ABK12517.1

Gene names

Ordered Locus Names:

Bcen2424_5784 EMBL ABK12517.1

Organism

Burkholderia cenocepacia (strain HI2424) [Complete proteome] [HAMAP] EMBL ABK12517.1

Taxonomic identifier

331272 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia › Burkholderia cepacia complex › Burkholderia cenocepacia

Protein attributes

Sequence length	209 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. RuleBase RU000710 SAAS SAAS001647

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000710 SAAS SAAS001647
Ligand	DNA-binding RuleBase RU000710 SAAS SAAS001647
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0B4E1 [UniParc]. Last modified November 28, 2006. Version 1. Checksum: BBAF8619FD007194	FASTA	209	23,101
	10 20 30 40 50 60 MRRFSPVISG SMARTRNENL HQQRREQILT AAARVFKAKG FHGARTEDIC AAADMSAGAV 70 80 90 100 110 120 FRYFADKREM IDAIIAVEVE RYTQDFDRIL SKDGLRWLAN ITADELTGML AQGDDGLGVD 130 140 150 160 170 180 SWLELARDAE RRPDIVGLDR KMRADLAGLL ASGQAEGWVR PSLDPAGTTN IVFAMFNGLW 190 200 LDRSLGTSVD MERTAAALGD FFRTCVLVA

References

[1]

"Complete sequence of chromosome 2 of Burkholderia cenocepacia HI2424." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HI2424.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000459 Genomic DNA. Translation: ABK12517.1.
RefSeq	YP_839410.1. NC_008543.1.
3D structure databases
ProteinModelPortal	A0B4E1.
ModBase	Search...
Protein-protein interaction databases
STRING	331272.Bcen2424_5784.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABK12517; ABK12517; Bcen2424_5784.
GeneID	4452266.
KEGG	bch:Bcen2424_5784.
PATRIC	19069207. VBIBurCen15205_5920.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1309.
HOGENOM	HOG000221479.
OMA	HQLWVEI.
ProtClustDB	CLSK775959.
Enzyme and pathway databases
BioCyc	BCEN331272:GHR7-3711-MONOMER.
Family and domain databases
Gene3D	1.10.357.10. 1 hit.
InterPro	IPR009057. Homeodomain-like. IPR001647. HTH_TetR. IPR015893. Tet_transcr_reg_TetR-like_C. IPR011075. Tet_transcr_reg_TetR-rel_C. [Graphical view]
Pfam	PF00440. TetR_N. 1 hit. [Graphical view]
PRINTS	PR00455. HTHTETR.
SUPFAM	SSF46689. Homeodomain_like. 1 hit. SSF48498. TetR_like_C. 1 hit.
PROSITE	PS50977. HTH_TETR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0B4E1_BURCH

Accession

Primary (citable) accession number: A0B4E1

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2006
Last sequence update:	November 28, 2006
Last modified:	May 1, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)