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A0B4E1

- A0B4E1_BURCH

UniProt

A0B4E1 - A0B4E1_BURCH

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Protein
Submitted name:

Transcriptional regulator, TetR family

Gene

Bcen2424_5784

Organism
Burkholderia cenocepacia (strain HI2424)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: UniProtKB-KW
  2. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciBCEN331272:GHR7-5864-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, TetR familyImported
Gene namesi
Ordered Locus Names:Bcen2424_5784Imported
OrganismiBurkholderia cenocepacia (strain HI2424)Imported
Taxonomic identifieri331272 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
ProteomesiUP000000776: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi331272.Bcen2424_5784.

Structurei

3D structure databases

ProteinModelPortaliA0B4E1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation
Contains HTH tetR-type DNA-binding domain.SAAS annotation

Phylogenomic databases

eggNOGiCOG1309.
HOGENOMiHOG000221479.
OMAiDFFRTYV.
OrthoDBiEOG6PP9N1.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0B4E1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRFSPVISG SMARTRNENL HQQRREQILT AAARVFKAKG FHGARTEDIC
60 70 80 90 100
AAADMSAGAV FRYFADKREM IDAIIAVEVE RYTQDFDRIL SKDGLRWLAN
110 120 130 140 150
ITADELTGML AQGDDGLGVD SWLELARDAE RRPDIVGLDR KMRADLAGLL
160 170 180 190 200
ASGQAEGWVR PSLDPAGTTN IVFAMFNGLW LDRSLGTSVD MERTAAALGD

FFRTCVLVA
Length:209
Mass (Da):23,101
Last modified:November 28, 2006 - v1
Checksum:iBBAF8619FD007194
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000459 Genomic DNA. Translation: ABK12517.1.
RefSeqiWP_011548677.1. NC_008543.1.
YP_839410.1. NC_008543.1.

Genome annotation databases

EnsemblBacteriaiABK12517; ABK12517; Bcen2424_5784.
GeneIDi4452266.
KEGGibch:Bcen2424_5784.
PATRICi19069207. VBIBurCen15205_5920.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000459 Genomic DNA. Translation: ABK12517.1 .
RefSeqi WP_011548677.1. NC_008543.1.
YP_839410.1. NC_008543.1.

3D structure databases

ProteinModelPortali A0B4E1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 331272.Bcen2424_5784.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABK12517 ; ABK12517 ; Bcen2424_5784 .
GeneIDi 4452266.
KEGGi bch:Bcen2424_5784.
PATRICi 19069207. VBIBurCen15205_5920.

Phylogenomic databases

eggNOGi COG1309.
HOGENOMi HOG000221479.
OMAi DFFRTYV.
OrthoDBi EOG6PP9N1.

Enzyme and pathway databases

BioCyci BCEN331272:GHR7-5864-MONOMER.

Family and domain databases

Gene3Di 1.10.357.10. 1 hit.
InterProi IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view ]
Pfami PF00440. TetR_N. 1 hit.
[Graphical view ]
PRINTSi PR00455. HTHTETR.
SUPFAMi SSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEi PS50977. HTH_TETR_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome 2 of Burkholderia cenocepacia HI2424."
    Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
    , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P.
    Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HI2424Imported.

Entry informationi

Entry nameiA0B4E1_BURCH
AccessioniPrimary (citable) accession number: A0B4E1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: October 29, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3