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A0B4E1

- A0B4E1_BURCH

UniProt

A0B4E1 - A0B4E1_BURCH

Protein
Submitted name:

Transcriptional regulator, TetR family

Gene

Bcen2424_5784

Organism
Burkholderia cenocepacia (strain HI2424)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (28 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: UniProtKB-KW
    2. transcription, DNA-templated Source: UniProtKB-KW

    Keywords - Biological processi

    Transcription, Transcription regulationUniRule annotationSAAS annotation

    Keywords - Ligandi

    DNA-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciBCEN331272:GHR7-5864-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Transcriptional regulator, TetR familyImported
    Gene namesi
    Ordered Locus Names:Bcen2424_5784Imported
    OrganismiBurkholderia cenocepacia (strain HI2424)Imported
    Taxonomic identifieri331272 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex
    ProteomesiUP000000776: Chromosome 2

    Interactioni

    Protein-protein interaction databases

    STRINGi331272.Bcen2424_5784.

    Structurei

    3D structure databases

    ProteinModelPortaliA0B4E1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation
    Contains HTH tetR-type DNA-binding domain.SAAS annotation

    Phylogenomic databases

    eggNOGiCOG1309.
    HOGENOMiHOG000221479.
    OMAiDFFRTYV.
    OrthoDBiEOG6PP9N1.

    Family and domain databases

    Gene3Di1.10.357.10. 1 hit.
    InterProiIPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    IPR011075. Tet_transcr_reg_TetR-rel_C.
    [Graphical view]
    PfamiPF00440. TetR_N. 1 hit.
    [Graphical view]
    PRINTSiPR00455. HTHTETR.
    SUPFAMiSSF46689. SSF46689. 1 hit.
    SSF48498. SSF48498. 1 hit.
    PROSITEiPS50977. HTH_TETR_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A0B4E1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRRFSPVISG SMARTRNENL HQQRREQILT AAARVFKAKG FHGARTEDIC    50
    AAADMSAGAV FRYFADKREM IDAIIAVEVE RYTQDFDRIL SKDGLRWLAN 100
    ITADELTGML AQGDDGLGVD SWLELARDAE RRPDIVGLDR KMRADLAGLL 150
    ASGQAEGWVR PSLDPAGTTN IVFAMFNGLW LDRSLGTSVD MERTAAALGD 200
    FFRTCVLVA 209
    Length:209
    Mass (Da):23,101
    Last modified:November 28, 2006 - v1
    Checksum:iBBAF8619FD007194
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000459 Genomic DNA. Translation: ABK12517.1.
    RefSeqiWP_011548677.1. NC_008543.1.
    YP_839410.1. NC_008543.1.

    Genome annotation databases

    EnsemblBacteriaiABK12517; ABK12517; Bcen2424_5784.
    GeneIDi4452266.
    KEGGibch:Bcen2424_5784.
    PATRICi19069207. VBIBurCen15205_5920.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000459 Genomic DNA. Translation: ABK12517.1 .
    RefSeqi WP_011548677.1. NC_008543.1.
    YP_839410.1. NC_008543.1.

    3D structure databases

    ProteinModelPortali A0B4E1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 331272.Bcen2424_5784.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABK12517 ; ABK12517 ; Bcen2424_5784 .
    GeneIDi 4452266.
    KEGGi bch:Bcen2424_5784.
    PATRICi 19069207. VBIBurCen15205_5920.

    Phylogenomic databases

    eggNOGi COG1309.
    HOGENOMi HOG000221479.
    OMAi DFFRTYV.
    OrthoDBi EOG6PP9N1.

    Enzyme and pathway databases

    BioCyci BCEN331272:GHR7-5864-MONOMER.

    Family and domain databases

    Gene3Di 1.10.357.10. 1 hit.
    InterProi IPR009057. Homeodomain-like.
    IPR001647. HTH_TetR.
    IPR015893. Tet_transcr_reg_TetR-like_C.
    IPR011075. Tet_transcr_reg_TetR-rel_C.
    [Graphical view ]
    Pfami PF00440. TetR_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00455. HTHTETR.
    SUPFAMi SSF46689. SSF46689. 1 hit.
    SSF48498. SSF48498. 1 hit.
    PROSITEi PS50977. HTH_TETR_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome 2 of Burkholderia cenocepacia HI2424."
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.
      , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P.
      Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HI2424Imported.

    Entry informationi

    Entry nameiA0B4E1_BURCH
    AccessioniPrimary (citable) accession number: A0B4E1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2006
    Last sequence update: November 28, 2006
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3