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A0B4E1 (A0B4E1_BURCH) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Bcen2424_5784 EMBL ABK12517.1
OrganismBurkholderia cenocepacia (strain HI2424) [Complete proteome] [HAMAP] EMBL ABK12517.1
Taxonomic identifier331272 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiaBurkholderia cepacia complex

Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH tetR-type DNA-binding domain. RuleBase RU000710

Contains HTH tetR-type DNA-binding domain. SAAS SAAS001647

Sequences

Sequence LengthMass (Da)Tools
A0B4E1 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: BBAF8619FD007194

FASTA20923,101
        10         20         30         40         50         60 
MRRFSPVISG SMARTRNENL HQQRREQILT AAARVFKAKG FHGARTEDIC AAADMSAGAV 

        70         80         90        100        110        120 
FRYFADKREM IDAIIAVEVE RYTQDFDRIL SKDGLRWLAN ITADELTGML AQGDDGLGVD 

       130        140        150        160        170        180 
SWLELARDAE RRPDIVGLDR KMRADLAGLL ASGQAEGWVR PSLDPAGTTN IVFAMFNGLW 

       190        200 
LDRSLGTSVD MERTAAALGD FFRTCVLVA 

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia cenocepacia HI2424."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Kim E., LiPuma J.J., Gonzalez C.F., Konstantinidis K., Tiedje J.M., Richardson P.
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HI2424.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000459 Genomic DNA. Translation: ABK12517.1.
RefSeqYP_839410.1. NC_008543.1.

3D structure databases

ProteinModelPortalA0B4E1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING331272.Bcen2424_5784.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABK12517; ABK12517; Bcen2424_5784.
GeneID4452266.
KEGGbch:Bcen2424_5784.
PATRIC19069207. VBIBurCen15205_5920.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1309.
HOGENOMHOG000221479.
OMAHQLWVEI.
OrthoDBEOG6PP9N1.
ProtClustDBCLSK775959.

Enzyme and pathway databases

BioCycBCEN331272:GHR7-5864-MONOMER.

Family and domain databases

Gene3D1.10.357.10. 1 hit.
InterProIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSPR00455. HTHTETR.
SUPFAMSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA0B4E1_BURCH
AccessionPrimary (citable) accession number: A0B4E1
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: February 19, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)