Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

N-acetylmuramoyl-L-alanine amidase, family 2

Gene

ami

Organism
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. N-acetylmuramoyl-L-alanine amidase activity Source: UniProtKB-EC

GO - Biological processi

  1. peptidoglycan catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-2584-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
N-acetylmuramoyl-L-alanine amidase, family 2Imported (EC:3.5.1.28Imported)
Gene namesi
Name:amiImported
Ordered Locus Names:lwe2508Imported
OrganismiListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)Imported
Taxonomic identifieri386043 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000000779: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi386043.lwe2508.

Structurei

3D structure databases

ProteinModelPortaliA0ALP4.
SMRiA0ALP4. Positions 276-600.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG5632.
HOGENOMiHOG000077291.
KOiK13731.
OMAiKANEAYY.
OrthoDBiEOG6GXTN7.

Family and domain databases

Gene3Di3.40.80.10. 1 hit.
InterProiIPR002502. Amidase_domain.
IPR025987. SH3-like_dom.
[Graphical view]
PfamiPF01510. Amidase_2. 1 hit.
PF13457. SH3_8. 4 hits.
[Graphical view]
SMARTiSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMiSSF55846. SSF55846. 1 hit.

Sequencei

Sequence statusi: Complete.

A0ALP4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKLVKSAVV FASLAFIGAS ATMITENASA ASIDTVQKVD DQSIYIPKGI
60 70 80 90 100
RDGTATEEHD GFEDETNSVL KEVPLLRAAG YPDVNSYIKT NKFSTASIEK
110 120 130 140 150
QLKSQFPKFN YRNGYGKPEG IVIHETANNS STITGEINYM STNYNNAFVH
160 170 180 190 200
AFVDKSRIIQ IHPTENGVWG AGQYANARFI QVELVRSKTF DEFSRSINNY
210 220 230 240 250
AYYTAYLLDQ YKLPVDSAHS DGKGTVWSHD AVTRYLGGTT HTDPVGYFNQ
260 270 280 290 300
WGYNFNSFVT LVNEKYKAIQ SSKVTYDKIE YDKGVTAYAR VKTAPGNAVW
310 320 330 340 350
TKPYKTEGAK GINPLSVYVG KNMRILREAK TPITTWYQFS IDGKTIGWVD
360 370 380 390 400
TRALDTFYKQ SMEKPANLTR YVLANKANEA YYKVPVADSA VKWGTLSTYK
410 420 430 440 450
NQKLTVDRQA TIEGQLWYRI KTSSTFIGWT KAANLTTVSP VDKIEYDKGV
460 470 480 490 500
TAYARVKTAP GNAVWTKPYK TEGAKGVNPL SVYVGKNMRI LREAKTPITT
510 520 530 540 550
WYQFSIDGKT IGWVDTRALN TFYKQSMEKP ANLTRYVLAN KANEAYYKVP
560 570 580 590 600
VADSAVKWGT LSTYKNQKLT VDRQATIEGQ LWYRIKTSST FIGWTKAANL

STSK
Length:604
Mass (Da):67,793
Last modified:November 28, 2006 - v1
Checksum:iAE12A665DB58EA5C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21926.1.
RefSeqiYP_850705.1. NC_008555.1.

Genome annotation databases

EnsemblBacteriaiCAK21926; CAK21926; lwe2508.
GeneIDi4464956.
KEGGilwe:lwe2508.
PATRICi20332271. VBILisWel39304_2516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21926.1.
RefSeqiYP_850705.1. NC_008555.1.

3D structure databases

ProteinModelPortaliA0ALP4.
SMRiA0ALP4. Positions 276-600.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386043.lwe2508.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK21926; CAK21926; lwe2508.
GeneIDi4464956.
KEGGilwe:lwe2508.
PATRICi20332271. VBILisWel39304_2516.

Phylogenomic databases

eggNOGiCOG5632.
HOGENOMiHOG000077291.
KOiK13731.
OMAiKANEAYY.
OrthoDBiEOG6GXTN7.

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-2584-MONOMER.

Family and domain databases

Gene3Di3.40.80.10. 1 hit.
InterProiIPR002502. Amidase_domain.
IPR025987. SH3-like_dom.
[Graphical view]
PfamiPF01510. Amidase_2. 1 hit.
PF13457. SH3_8. 4 hits.
[Graphical view]
SMARTiSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMiSSF55846. SSF55846. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
    Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T.
    , Lampidis R., Kreft J., Goebel W., Chakraborty T.
    J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35897 / DSM 20650 / SLCC5334Imported.

Entry informationi

Entry nameiA0ALP4_LISW6
AccessioniPrimary (citable) accession number: A0ALP4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: February 4, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.