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A0ALP4 (A0ALP4_LISW6) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.5.1.28 EMBL CAK21926.1
Gene names
Name:ami EMBL CAK21926.1
Ordered Locus Names:lwe2508 EMBL CAK21926.1
OrganismListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) [Complete proteome] [HAMAP] EMBL CAK21926.1
Taxonomic identifier386043 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length604 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL CAK21926.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionN-acetylmuramoyl-L-alanine amidase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0ALP4 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: AE12A665DB58EA5C

FASTA60467,793
        10         20         30         40         50         60 
MKKLVKSAVV FASLAFIGAS ATMITENASA ASIDTVQKVD DQSIYIPKGI RDGTATEEHD 

        70         80         90        100        110        120 
GFEDETNSVL KEVPLLRAAG YPDVNSYIKT NKFSTASIEK QLKSQFPKFN YRNGYGKPEG 

       130        140        150        160        170        180 
IVIHETANNS STITGEINYM STNYNNAFVH AFVDKSRIIQ IHPTENGVWG AGQYANARFI 

       190        200        210        220        230        240 
QVELVRSKTF DEFSRSINNY AYYTAYLLDQ YKLPVDSAHS DGKGTVWSHD AVTRYLGGTT 

       250        260        270        280        290        300 
HTDPVGYFNQ WGYNFNSFVT LVNEKYKAIQ SSKVTYDKIE YDKGVTAYAR VKTAPGNAVW 

       310        320        330        340        350        360 
TKPYKTEGAK GINPLSVYVG KNMRILREAK TPITTWYQFS IDGKTIGWVD TRALDTFYKQ 

       370        380        390        400        410        420 
SMEKPANLTR YVLANKANEA YYKVPVADSA VKWGTLSTYK NQKLTVDRQA TIEGQLWYRI 

       430        440        450        460        470        480 
KTSSTFIGWT KAANLTTVSP VDKIEYDKGV TAYARVKTAP GNAVWTKPYK TEGAKGVNPL 

       490        500        510        520        530        540 
SVYVGKNMRI LREAKTPITT WYQFSIDGKT IGWVDTRALN TFYKQSMEKP ANLTRYVLAN 

       550        560        570        580        590        600 
KANEAYYKVP VADSAVKWGT LSTYKNQKLT VDRQATIEGQ LWYRIKTSST FIGWTKAANL 


STSK 

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References

[1]"Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T. expand/collapse author list , Lampidis R., Kreft J., Goebel W., Chakraborty T.
J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35897 / DSM 20650 / SLCC5334.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM263198 Genomic DNA. Translation: CAK21926.1.
RefSeqYP_850705.1. NC_008555.1.

3D structure databases

ProteinModelPortalA0ALP4.
SMRA0ALP4. Positions 276-600.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING386043.lwe2508.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK21926; CAK21926; lwe2508.
GeneID4464956.
KEGGlwe:lwe2508.
PATRIC20332271. VBILisWel39304_2516.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG5632.
HOGENOMHOG000077291.
KOK13731.
OMAQLWYRVK.
OrthoDBEOG6GXTN7.
ProtClustDBCLSK565002.

Enzyme and pathway databases

BioCycLWEL386043:GI5X-2584-MONOMER.

Family and domain databases

Gene3D3.40.80.10. 1 hit.
InterProIPR002502. Amidase_domain.
IPR025987. SH3-like_dom.
[Graphical view]
PfamPF01510. Amidase_2. 1 hit.
PF13457. SH3_8. 4 hits.
[Graphical view]
SMARTSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMSSF55846. SSF55846. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0ALP4_LISW6
AccessionPrimary (citable) accession number: A0ALP4
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: November 13, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)