A0ALF2 (A0ALF2_LISW6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitin-binding protein/carbohydrate-binding protein EMBL CAK21834.1

Gene names

Name:	chb EMBL CAK21834.1
Ordered Locus Names:	lwe2416

Organism

Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) [Complete proteome] [HAMAP] EMBL CAK21834.1

Taxonomic identifier

386043 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	478 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro viral capsid Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A0ALF2 [UniParc]. Last modified November 28, 2006. Version 1. Checksum: 4037FF977D59240D	FASTA	478	52,490
	10 20 30 40 50 60 MKKFSKIGMF FAVVVLAVVL FETSVSAHGY ISKPASRVYL ANQGINTGVG AAEYEPQSIE 70 80 90 100 110 120 AAKGFPTNGP QDGNIAGGGK YPLLDEQTQD RWTKVDIKSG PLNVEWTLTA PHRTSNWEYF 130 140 150 160 170 180 ITKKGWDPNK PLTRAEFEPL AQITADGSTP DQLTKQQITI PNDRSGYYVI LGVWSIADTG 190 200 210 220 230 240 NAFYQVIDAN IINSDVTPVV DKESPTAPTN LIGTTTANKV SLKWNAATDN VGINGYEILR 250 260 270 280 290 300 DGKVVGESQT TTYEDNTVNA NTTYTYTVRA KDFAGNKSAL GNKISVTTKE APAADKEAPT 310 320 330 340 350 360 APTSLMSHAQ TDRAIDLCWQ ASSDNVAVKN YEIYRNNTKI TTTTSTMFQD INLINNTSYK 370 380 390 400 410 420 YKIYAVDIAG NRSLASNEIT VKTKPLDISN TWKPDQIYNA GNQVVYNGIA YTAQWWTKDN 430 440 450 460 470 SPDTSDVWKT ASSTTQVWNA LKAYNGGDKV TYGGKTYQAK WWVKGETPDT STIWTLVK

References

[1]

"Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes." Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T. , Lampidis R., Kreft J., Goebel W., Chakraborty T. J. Bacteriol. 188:7405-7415(2006) [PubMed: 16936040] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM263198 Genomic DNA. Translation: CAK21834.1.
RefSeq	YP_850613.1. NC_008555.1.
3D structure databases
ProteinModelPortal	A0ALF2.
SMR	A0ALF2. Positions 28-191.
ModBase	Search...
Protein-protein interaction databases
STRING	A0ALF2.
Protein family/group databases
CAZy	CBM33. Carbohydrate-Binding Module Family 33. CBM5. Carbohydrate-Binding Module Family 5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4465025.
GenomeReviews	Gene locus lwe2416 in contig AM263198_GR.
KEGG	lwe:lwe2416.
NMPDR	fig|386043.6.peg.2347.
PATRIC	20332089. VBILisWel39304_2425.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3397.
HOGENOM	HBG757921.
OMA	AVDNEAP.
ProtClustDB	CLSK2484877.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR004302. Chitin-bd_3. IPR003961. Fibronectin_type3. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 2 hits.
KO	K03933.
Pfam	PF02839. CBM_5_12. 2 hits. PF03067. Chitin_bind_3. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 2 hits. SM00060. FN3. 2 hits. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 2 hits. SSF49265. FN_III-like. 2 hits. SSF81296. Ig_E-set. 1 hit.
PROSITE	PS50853. FN3. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A0ALF2_LISW6

Accession

Primary (citable) accession number: A0ALF2

Entry history

Integrated into UniProtKB/TrEMBL:	November 28, 2006
Last sequence update:	November 28, 2006
Last modified:	December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)