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Protein

Glutamate decarboxylase

Gene

gadB

Organism
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-2456-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadBImported
Ordered Locus Names:lwe2381Imported
OrganismiListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)Imported
Taxonomic identifieri386043 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000000779 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi386043.lwe2381.

Structurei

3D structure databases

ProteinModelPortaliA0ALB7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiFVGTWMD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A0ALB7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLYSENDKRK HESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ
60 70 80 90 100
LMDEGNARQN LATFCQTYME KEAELLMAET LEKNAIDKSE YPQTAELENR
110 120 130 140 150
CVNILADLWN APKEMSYLGT STVGSSEACM LGGLAMKFRW RNNAEKRGLD
160 170 180 190 200
IQAKRPNLII SSGYQVCWEK FCVYWDVDMR VVPMDKEHLS LDVDKVFELV
210 220 230 240 250
DEYTIGIVGI LGITYTGKFD DIALLDERVE AYNATNEHQL VIHIDGASGA
260 270 280 290 300
MFTPFVNPEL SWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE
310 320 330 340 350
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRFGFEG YREIHEKTKK
360 370 380 390 400
TALYLAKTVE KSGYFDIIND GSNLPIVCYK LKEGLDIEWT LYDLADQLLM
410 420 430 440 450
KGWQVPAYPL PADLSDTIIQ RFVCRADLGY NVAEEFAADF AEALHNLEHA
460
RVLYHDKGRN DSYGFTH
Length:467
Mass (Da):53,532
Last modified:November 28, 2006 - v1
Checksum:i1137408B57A68C28
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21799.1.
RefSeqiWP_011703122.1. NC_008555.1.
YP_850578.1. NC_008555.1.

Genome annotation databases

EnsemblBacteriaiCAK21799; CAK21799; lwe2381.
KEGGilwe:lwe2381.
PATRICi20332019. VBILisWel39304_2391.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21799.1.
RefSeqiWP_011703122.1. NC_008555.1.
YP_850578.1. NC_008555.1.

3D structure databases

ProteinModelPortaliA0ALB7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386043.lwe2381.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK21799; CAK21799; lwe2381.
KEGGilwe:lwe2381.
PATRICi20332019. VBILisWel39304_2391.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiFVGTWMD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-2456-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
    Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Karst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Ohler A.P., Weisshaar B., Wehland J., Liang C., Dandekar T.
    , Lampidis R., Kreft J., Goebel W., Chakraborty T.
    J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35897 / DSM 20650 / SLCC5334Imported.

Entry informationi

Entry nameiA0ALB7_LISW6
AccessioniPrimary (citable) accession number: A0ALB7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: May 27, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.