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A0AKN2 (A0AKN2_LISW6) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-amylase EMBL CAK21564.1
EC=3.2.1.135 EMBL CAK21564.1
Gene names
Ordered Locus Names:lwe2146
OrganismListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) [Complete proteome] [HAMAP] EMBL CAK21564.1
Taxonomic identifier386043 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length591 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL CAK21564.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

neopullulanase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A0AKN2 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: A5D1B7AFE9655747

FASTA59168,604
        10         20         30         40         50         60 
MEKAGIYHQP ASSYAYSYDA KTLHIRIRTK RLDISEVTLI AADPYLWNDG KWQSESYSMR 

        70         80         90        100        110        120 
KIAETEEHDY WFFAITPEHR RLQYGFLLTD TDGKTIFYGG RGFFEPTEAN LATMDYYFKF 

       130        140        150        160        170        180 
PFIHAVDTFE APEWVSNTIW YQIFPERFAN GNPAISPENV LPWGSKDPTP TDFFGGDIEG 

       190        200        210        220        230        240 
IIEHLDYLVD LGINGIYLTP VFEAPTNHKY DTIDYKKIDP HFGDKETFRK LVQEAHKRGI 

       250        260        270        280        290        300 
RIMLDAVFNH IGDTSAEWQD VIEKEEKSAY RDWFHIHSFP VRQNENGNIE GEPTLSYDTF 

       310        320        330        340        350        360 
AFTTHMPKLN TANPEVQKYL LDIATYWIRE FDIDGWRLDV ANEVDHAFWK EFKKAVQAEK 

       370        380        390        400        410        420 
EDIYILGEIW HDSWIWLLGD EFHAVMNYPF TQTIIENFIE EKITPEQMVS GINEQYMRYP 

       430        440        450        460        470        480 
NQVNEVMFNM LDSHDTARIL TRANNDEEKV KQALAFMFAH TGSPCIYYGT EIGMDGGNDP 

       490        500        510        520        530        540 
GCRKCMEWDE AKQNQAMLAF TKQLIALRKD NQAIITSGEL TWLDASSETG ITAFTKELNG 

       550        560        570        580        590 
EKLHFLFNQA KDNQDFTISF EKEAMDIWNN QAVSENLTIP AKGFLVIKEN S

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References

[1]"Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T. expand/collapse author list , Lampidis R., Kreft J., Goebel W., Chakraborty T.
J. Bacteriol. 188:7405-7415(2006) [PubMed: 16936040] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM263198 Genomic DNA. Translation: CAK21564.1.
RefSeqYP_850343.1. NC_008555.1.

3D structure databases

ProteinModelPortalA0AKN2.
SMRA0AKN2. Positions 1-589.
ModBaseSearch...

Protein-protein interaction databases

STRINGA0AKN2.

Protein family/group databases

CAZyCBM34. Carbohydrate-Binding Module Family 34.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID4464014.
GenomeReviewsGene locus lwe2146 in contig AM263198_GR.
KEGGlwe:lwe2146.
NMPDRfig|386043.6.peg.2086.
PATRIC20331501. VBILisWel39304_2156.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHBG726713.
OMAETVWYQI.
PhylomeDBA0AKN2.
ProtClustDBCLSK561347.

Family and domain databases

InterProIPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004185. Glyco_hydro_13_lg-like_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
Gene3DG3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
KOK01234.
PANTHERPTHR10357. Alpha_amylase. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02903. Alpha-amylase_N. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0AKN2_LISW6
AccessionPrimary (citable) accession number: A0AKN2
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: December 14, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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