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Protein
Submitted name:

Listeria welshimeri serovar 6b str. SLCC5334 complete genome

Gene

lwe1717

Organism
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-1763-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Listeria welshimeri serovar 6b str. SLCC5334 complete genomeImported
Gene namesi
Ordered Locus Names:lwe1717Imported
OrganismiListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)Imported
Taxonomic identifieri386043 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000000779 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi386043.lwe1717.

Structurei

3D structure databases

ProteinModelPortaliA0AJF3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000029531.
OMAiEALEYST.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0AJF3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNVYADKEDA TLLLDGLLQN VAIMRFDINK KVTYVNALFA EAMGYTEEEM
60 70 80 90 100
LELSHPDLCF PDFVQTATYK EMWTNLLAGQ KFQNKIERKN ARGERVWFEA
110 120 130 140 150
TYIPIFLENT VIGVAKIATD ITRREETVHD FASGLKNMAT NLKEHSSVGK
160 170 180 190 200
TRSEALLNLV KSITKESNEN TVTLHDLQTE AQNIHGIINT INGIASQTNL
210 220 230 240 250
LALNAAIEAA RAGDAGRGFS VVAEEVRKLS SRVEEAIKEV EKSVNGITQE
260 270 280 290 300
INTISSGTER VEAKVEESQE VLILSLEDFN QIESASTALD QNAGAFTKMI
Length:300
Mass (Da):33,247
Last modified:November 28, 2006 - v1
Checksum:i6657D0F34D74FA95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21135.1.
RefSeqiWP_011702497.1. NC_008555.1.
YP_849914.1. NC_008555.1.

Genome annotation databases

EnsemblBacteriaiCAK21135; CAK21135; lwe1717.
KEGGilwe:lwe1717.
PATRICi20330633. VBILisWel39304_1727.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM263198 Genomic DNA. Translation: CAK21135.1.
RefSeqiWP_011702497.1. NC_008555.1.
YP_849914.1. NC_008555.1.

3D structure databases

ProteinModelPortaliA0AJF3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi386043.lwe1717.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAK21135; CAK21135; lwe1717.
KEGGilwe:lwe1717.
PATRICi20330633. VBILisWel39304_1727.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000029531.
OMAiEALEYST.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-1763-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
    Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Karst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Ohler A.P., Weisshaar B., Wehland J., Liang C., Dandekar T.
    , Lampidis R., Kreft J., Goebel W., Chakraborty T.
    J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35897 / DSM 20650 / SLCC5334Imported.

Entry informationi

Entry nameiA0AJF3_LISW6
AccessioniPrimary (citable) accession number: A0AJF3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: April 29, 2015
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.