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A0AFB3

- A0AFB3_LISW6

UniProt

A0AFB3 - A0AFB3_LISW6

Protein
Submitted name:

AP endonuclease, family 2

Gene

lwe0277

Organism
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 47 (01 Oct 2014)
      Sequence version 1 (28 Nov 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. endonuclease activity Source: UniProtKB-KW
    2. xylose isomerase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    EndonucleaseImported, Hydrolase, IsomeraseImported, Nuclease

    Enzyme and pathway databases

    BioCyciLWEL386043:GI5X-293-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AP endonuclease, family 2Imported (EC:5.3.1.5Imported)
    Gene namesi
    Ordered Locus Names:lwe0277Imported
    OrganismiListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)Imported
    Taxonomic identifieri386043 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
    ProteomesiUP000000779: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi386043.lwe0277.

    Structurei

    3D structure databases

    ProteinModelPortaliA0AFB3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG4952.
    HOGENOMiHOG000224339.
    KOiK01805.
    OMAiHTHWNSQ.
    OrthoDBiEOG651SS4.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51658. SSF51658. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A0AFB3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLATRINSF LSVYDNDLKN VFGEFKKLGL GYIDLNYPEH IEKFKAPEMK    50
    ALIQENDLKL NGVALRFRSE FINGELGNSD PKISANALKL CKDAADYCRE 100
    AGGKVVTIWL GFDGFDYSFQ INYKKVWEQL RNAFTEIADY APDLKISIEY 150
    KPFQPRAYAF IDSMGLTGMM LNDINRDNVG VTLDYCHMLM KHENPAFGAD 200
    IFGSQGKLYG VHLNDGYGLN DDGLMIGSAT PFKTLEFLYY VKKHNYDGVI 250
    YFDTFPIIEH AAKECEQNIR MITALNAMID NVGLAYIQTI IDKNDAVEAN 300
    KLMLQFLTSS N 311
    Length:311
    Mass (Da):35,247
    Last modified:November 28, 2006 - v1
    Checksum:i526B39FCCFD99485
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM263198 Genomic DNA. Translation: CAK19695.1.
    RefSeqiWP_011701133.1. NC_008555.1.
    YP_848478.1. NC_008555.1.

    Genome annotation databases

    EnsemblBacteriaiCAK19695; CAK19695; lwe0277.
    GeneIDi4464150.
    KEGGilwe:lwe0277.
    PATRICi20327679. VBILisWel39304_0280.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM263198 Genomic DNA. Translation: CAK19695.1 .
    RefSeqi WP_011701133.1. NC_008555.1.
    YP_848478.1. NC_008555.1.

    3D structure databases

    ProteinModelPortali A0AFB3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 386043.lwe0277.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAK19695 ; CAK19695 ; lwe0277 .
    GeneIDi 4464150.
    KEGGi lwe:lwe0277.
    PATRICi 20327679. VBILisWel39304_0280.

    Phylogenomic databases

    eggNOGi COG4952.
    HOGENOMi HOG000224339.
    KOi K01805.
    OMAi HTHWNSQ.
    OrthoDBi EOG651SS4.

    Enzyme and pathway databases

    BioCyci LWEL386043:GI5X-293-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51658. SSF51658. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
      Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T.
      , Lampidis R., Kreft J., Goebel W., Chakraborty T.
      J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 35897 / DSM 20650 / SLCC5334Imported.

    Entry informationi

    Entry nameiA0AFB3_LISW6
    AccessioniPrimary (citable) accession number: A0AFB3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 28, 2006
    Last sequence update: November 28, 2006
    Last modified: October 1, 2014
    This is version 47 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3