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A0AFB3

- A0AFB3_LISW6

UniProt

A0AFB3 - A0AFB3_LISW6

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Protein
Submitted name: AP endonuclease, family 2
Gene
lwe0277
Organism
Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. endonuclease activity Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

EndonucleaseImported, Hydrolase, IsomeraseImported, Nuclease

Enzyme and pathway databases

BioCyciLWEL386043:GI5X-293-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AP endonuclease, family 2Imported (EC:5.3.1.5Imported)
Gene namesi
Ordered Locus Names:lwe0277Imported
OrganismiListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)Imported
Taxonomic identifieri386043 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000000779: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi386043.lwe0277.

Structurei

3D structure databases

ProteinModelPortaliA0AFB3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4952.
HOGENOMiHOG000224339.
KOiK01805.
OMAiHTHWNSQ.
OrthoDBiEOG651SS4.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.

Sequencei

Sequence statusi: Complete.

A0AFB3-1 [UniParc]FASTAAdd to Basket

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MKLATRINSF LSVYDNDLKN VFGEFKKLGL GYIDLNYPEH IEKFKAPEMK    50
ALIQENDLKL NGVALRFRSE FINGELGNSD PKISANALKL CKDAADYCRE 100
AGGKVVTIWL GFDGFDYSFQ INYKKVWEQL RNAFTEIADY APDLKISIEY 150
KPFQPRAYAF IDSMGLTGMM LNDINRDNVG VTLDYCHMLM KHENPAFGAD 200
IFGSQGKLYG VHLNDGYGLN DDGLMIGSAT PFKTLEFLYY VKKHNYDGVI 250
YFDTFPIIEH AAKECEQNIR MITALNAMID NVGLAYIQTI IDKNDAVEAN 300
KLMLQFLTSS N 311
Length:311
Mass (Da):35,247
Last modified:November 28, 2006 - v1
Checksum:i526B39FCCFD99485
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM263198 Genomic DNA. Translation: CAK19695.1.
RefSeqiWP_011701133.1. NC_008555.1.
YP_848478.1. NC_008555.1.

Genome annotation databases

EnsemblBacteriaiCAK19695; CAK19695; lwe0277.
GeneIDi4464150.
KEGGilwe:lwe0277.
PATRICi20327679. VBILisWel39304_0280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM263198 Genomic DNA. Translation: CAK19695.1 .
RefSeqi WP_011701133.1. NC_008555.1.
YP_848478.1. NC_008555.1.

3D structure databases

ProteinModelPortali A0AFB3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 386043.lwe0277.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAK19695 ; CAK19695 ; lwe0277 .
GeneIDi 4464150.
KEGGi lwe:lwe0277.
PATRICi 20327679. VBILisWel39304_0280.

Phylogenomic databases

eggNOGi COG4952.
HOGENOMi HOG000224339.
KOi K01805.
OMAi HTHWNSQ.
OrthoDBi EOG651SS4.

Enzyme and pathway databases

BioCyci LWEL386043:GI5X-293-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
    Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T.
    , Lampidis R., Kreft J., Goebel W., Chakraborty T.
    J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35897 / DSM 20650 / SLCC5334.

Entry informationi

Entry nameiA0AFB3_LISW6
AccessioniPrimary (citable) accession number: A0AFB3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: September 3, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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