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A0AFB3 (A0AFB3_LISW6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=5.3.1.5 EMBL CAK19695.1
Gene names
Ordered Locus Names:lwe0277 EMBL CAK19695.1
OrganismListeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) [Complete proteome] [HAMAP] EMBL CAK19695.1
Taxonomic identifier386043 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length311 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
A0AFB3 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: 526B39FCCFD99485

FASTA31135,247
        10         20         30         40         50         60 
MKLATRINSF LSVYDNDLKN VFGEFKKLGL GYIDLNYPEH IEKFKAPEMK ALIQENDLKL 

        70         80         90        100        110        120 
NGVALRFRSE FINGELGNSD PKISANALKL CKDAADYCRE AGGKVVTIWL GFDGFDYSFQ 

       130        140        150        160        170        180 
INYKKVWEQL RNAFTEIADY APDLKISIEY KPFQPRAYAF IDSMGLTGMM LNDINRDNVG 

       190        200        210        220        230        240 
VTLDYCHMLM KHENPAFGAD IFGSQGKLYG VHLNDGYGLN DDGLMIGSAT PFKTLEFLYY 

       250        260        270        280        290        300 
VKKHNYDGVI YFDTFPIIEH AAKECEQNIR MITALNAMID NVGLAYIQTI IDKNDAVEAN 

       310 
KLMLQFLTSS N 

« Hide

References

[1]"Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes."
Hain T., Steinweg C., Kuenne C.T., Billion A., Ghai R., Chatterjee S.S., Domann E., Kaerst U., Goesmann A., Bekel T., Bartels D., Kaiser O., Meyer F., Puehler A., Weisshaar B., Wehland J., Liang C., Dandekar T. expand/collapse author list , Lampidis R., Kreft J., Goebel W., Chakraborty T.
J. Bacteriol. 188:7405-7415(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35897 / DSM 20650 / SLCC5334.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM263198 Genomic DNA. Translation: CAK19695.1.
RefSeqYP_848478.1. NC_008555.1.

3D structure databases

ProteinModelPortalA0AFB3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING386043.lwe0277.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAK19695; CAK19695; lwe0277.
GeneID4464150.
KEGGlwe:lwe0277.
PATRIC20327679. VBILisWel39304_0280.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4952.
HOGENOMHOG000224339.
KOK01805.
OMAHTHWNSQ.
OrthoDBEOG651SS4.

Enzyme and pathway databases

BioCycLWEL386043:GI5X-293-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. SSF51658. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0AFB3_LISW6
AccessionPrimary (citable) accession number: A0AFB3
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: May 14, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)