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A0AEF6 (A0AEF6_RUMFL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:scaE EMBL CAK18898.1
OrganismRuminococcus flavefaciens EMBL CAK18898.1
Taxonomic identifier1265 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminococcus

Protein attributes

Sequence length330 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2929 Potential EMBL CAK18898.1
Chain30 – 330301 Potential EMBL CAK18898.1
PRO_5000147936

Regions

Region31 – 333Sulfate 1 binding PDB 4IU2 PDB 4IU3
Region40 – 434Sulfate 2 binding PDB 4IU2 PDB 4IU3
Region160 – 1612Sulfate 3 binding PDB 4IU2 PDB 4IU3

Sites

Metal binding1651Calcium PDB 4IU2 PDB 4IU3
Metal binding1661Calcium; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding2001Calcium; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding2181Calcium; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding2201Calcium PDB 4IU2 PDB 4IU3
Binding site961Sulfate 3 PDB 4IU2 PDB 4IU3
Binding site1851Chloride 1; via amide nitrogen
Binding site1881Sulfate 4 PDB 4IU2 PDB 4IU3
Binding site2041Chloride 2
Binding site2151Sulfate 5 PDB 4IU3

Sequences

Sequence LengthMass (Da)Tools
A0AEF6 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: E0634623E4A3F577

FASTA33033,924
        10         20         30         40         50         60 
MKKNTLKKAI SAVAVSALAL TASSVSAFAL TDRGMTYDLD PKDGSSAATK PVLEVTKKVF 

        70         80         90        100        110        120 
DTAADAAGQT VTVEFKVSGA EGKYATTGYH IYWDERLEVV ATKTGAYAKK GAALEDSSLA 

       130        140        150        160        170        180 
KAENNGNGVF VASGADDDFG ADGVMWTVEL KVPADAKAGD VYPIDVAYQW DPSKGDLFTD 

       190        200        210        220        230        240 
NKDSAQGKLM QAYFFTQGIK SSSNPSTDEY LVKANATYAD GYIAIKAGEP ETTTTTTTTT 

       250        260        270        280        290        300 
TTTTTTTTTT TTTTSTSSTT TTTGSTTSAN AESTTGAAQS TGAQTTTAKS NSSDNKKTDS 

       310        320        330 
PKTGVTGVGV AVAGLAVAVG TAFALKKKED 

« Hide

References

[1]"Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens."
Sadanari J., Borovok I., Rincon M.T., Flint H.J., Antonopoulos D.A., Berg M.E., White B.A., Bayer E.A., Lamed R.
J. Bacteriol. 188:7971-7976(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: FD-1 EMBL CAK18898.1.
[2]"Atypical cohesin-dockerin complex responsible for cell surface attachment of cellulosomal components: binding fidelity, promiscuity, and structural buttresses."
Salama-Alber O., Jobby M.K., Chitayat S., Smith S.P., White B.A., Shimon L.J., Lamed R., Frolow F., Bayer E.A.
J. Biol. Chem. 288:16827-16838(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.97 ANGSTROMS) OF 29-230 IN COMPLEX WITH CALCIUM; CHLORIDE AND SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM262974 Genomic DNA. Translation: CAK18898.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4IU2X-ray2.00A29-230[»]
4IU3X-ray1.97A29-230[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR008965. Carb-bd_dom.
[Graphical view]
SUPFAMSSF49384. SSF49384. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA0AEF6_RUMFL
AccessionPrimary (citable) accession number: A0AEF6
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)