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A0AEF5 (A0AEF5_RUMFL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:cttA EMBL CAK18897.1
OrganismRuminococcus flavefaciens EMBL CAK18897.1
Taxonomic identifier1265 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesRuminococcaceaeRuminococcus

Protein attributes

Sequence length803 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3131 Potential EMBL CAK18897.1
Chain32 – 803772 Potential EMBL CAK18897.1
PRO_5000147935

Sites

Metal binding6841Calcium 1 PDB 4IU2 PDB 4IU3
Metal binding6861Calcium 1 PDB 4IU2 PDB 4IU3
Metal binding6881Calcium 1 PDB 4IU2 PDB 4IU3
Metal binding6901Calcium 1; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding6951Calcium 1 PDB 4IU2 PDB 4IU3
Metal binding7411Calcium 2 PDB 4IU2 PDB 4IU3
Metal binding7431Calcium 2; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding7601Calcium 2; via carbonyl oxygen PDB 4IU2 PDB 4IU3
Metal binding7651Calcium 2 PDB 4IU2 PDB 4IU3
Binding site6881Sulfate PDB 4IU2 PDB 4IU3
Binding site6941Sulfate PDB 4IU2 PDB 4IU3
Binding site7481Chloride; via amide nitrogen

Sequences

Sequence LengthMass (Da)Tools
A0AEF5 [UniParc].

Last modified November 28, 2006. Version 1.
Checksum: D61E1EE6F98E1766

FASTA80384,775
        10         20         30         40         50         60 
MKNSLFKRVA AAAAAVPLAL TQCLTFSSVA AENDAVQIVG NTVQDGAAQT VSLESLLYIP 

        70         80         90        100        110        120 
ANKTESTWNV TGSAALAKMV GTKGSINNAK ILDLVKYVPA NYREAAKAAL EEYVLVNPVT 

       130        140        150        160        170        180 
YEVTADKNIV LKATVSQPNF NGNWANTPGK ALSDLAKAYN APELNAVDFS SVKVGGDLVV 

       190        200        210        220        230        240 
TIKTSKLDEG TTVPVEVVYK TADGDIYAGD FAKFANDKLT ELENIAKKAI ENDVAAQYAK 

       250        260        270        280        290        300 
EATDKFLAKT ALIRDKINKA EKALDQALTK TADYKSISEA ADAANKFLAK KNINKKVPSS 

       310        320        330        340        350        360 
AAEVAAKETV KKYYDAAVKK ASAKADIQIT VEQLGAFVDS LTSKTLTDSE GNEFATAFDI 

       370        380        390        400        410        420 
NLNNGKATLV GAFEDAEAAD VQKWVESKGY AYVGSYKKLT GTVDFTGIKT ADTASVDVQI 

       430        440        450        460        470        480 
ERILVTETTT TTTTTTDDGS TTTTTTDDGS TTTTTTDDGS TTTTTSTTDD GSTTSTTSTT 

       490        500        510        520        530        540 
DDGSTTSTTS TTDDGSTTST TSTTDDGSTT STTSTTDDGS TTSTTSTTDD GSTTSTTSTT 

       550        560        570        580        590        600 
DDGSTTSTTS TTGDGSTTTT TTTTNTVTSA VKTQYVEIES VDGFYFNTED KFDTAQIKKA 

       610        620        630        640        650        660 
VLHTVYNEGY TGDDGVAVVL REYESEPVDI TAELTFGDAT PANTYKAVEN KFDYEIPVYY 

       670        680        690        700        710        720 
NNATLKDAEG NDATVTVYIG LKGDTDLNNI VDGRDATATL TYYAATSTDG KDATTVALSP 

       730        740        750        760        770        780 
STLVGGNPES VYDDFSAFLS DVKVDAGKEL TRFAKKAERL IDGRDASSIL TFYTKSSVDQ 

       790        800 
YKDMAANEPN KLWDIVTGDA EEE 

« Hide

References

[1]"Conservation and divergence in cellulosome architecture between two strains of Ruminococcus flavefaciens."
Sadanari J., Borovok I., Rincon M.T., Flint H.J., Antonopoulos D.A., Berg M.E., White B.A., Bayer E.A., Lamed R.
J. Bacteriol. 188:7971-7976(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: FD-1 EMBL CAK18897.1.
[2]"Atypical cohesin-dockerin complex responsible for cell surface attachment of cellulosomal components: binding fidelity, promiscuity, and structural buttresses."
Salama-Alber O., Jobby M.K., Chitayat S., Smith S.P., White B.A., Shimon L.J., Lamed R., Frolow F., Bayer E.A.
J. Biol. Chem. 288:16827-16838(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.97 ANGSTROMS) OF 565-803 IN COMPLEX WITH CALCIUM; CHLORIDE AND SULFATE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM262974 Genomic DNA. Translation: CAK18897.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4IU2X-ray2.00B565-803[»]
4IU3X-ray1.97B565-803[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameA0AEF5_RUMFL
AccessionPrimary (citable) accession number: A0AEF5
Entry history
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: June 11, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)