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Protein
Submitted name:

Putative regulatory protein

Gene

SAMR0779

Organism
Streptomyces ambofaciens ATCC 23877
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi44 – 63H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative regulatory proteinImported
Gene namesi
ORF Names:SAMR0779Imported
OrganismiStreptomyces ambofaciens ATCC 23877Imported
Taxonomic identifieri278992 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliA0ADD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 81HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.

Sequencei

Sequence statusi: Complete.

A0ADD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSSAAPRR GDRADAAGTR PPMREALVSA AFRLFLERGY EQTTVDDIVA
60 70 80 90 100
LAGVGRRSFF RYFPSKEDVV FPDHERCLAD MTAFLAASPG EADPVRRVCD
110 120 130 140 150
AARLVLRMYA ENPAFSVQRY HLTKKVPGLR AYELSVVWRY ERALAEYLRG
160 170 180 190 200
RLGGLPDGTL RADVIAAAVV AAHNNALRSW LRSQGRDDAG AAVDHALRYA
210 220 230 240
QSTFGDVPAA SPAGVTDDVV VVVARRGAPL WQVVREVETA FAREGGDG
Length:248
Mass (Da):26,993
Last modified:November 28, 2006 - v1
Checksum:i9896C8EA19EE8C8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM238664 Genomic DNA. Translation: CAJ88488.1.
RefSeqiWP_053140934.1. NZ_CP012382.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM238664 Genomic DNA. Translation: CAJ88488.1.
RefSeqiWP_053140934.1. NZ_CP012382.1.

3D structure databases

ProteinModelPortaliA0ADD2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeobox-like.
IPR001647. HTH_TetR.
PfamiView protein in Pfam
PF00440. TetR_N. 1 hit.
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiView protein in PROSITE
PS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA0ADD2_STRAM
AccessioniPrimary (citable) accession number: A0ADD2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: June 7, 2017
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.