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Protein
Submitted name:

Putative secreted glycosyl hydrolase

Gene

SAM23877_6967

Organism
Streptomyces ambofaciens ATCC 23877
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
CBM6. Carbohydrate-Binding Module Family 6.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative secreted glycosyl hydrolaseImported
Gene namesi
ORF Names:SAM23877_6967Imported, SAMR0616Imported
OrganismiStreptomyces ambofaciens ATCC 23877Imported
Taxonomic identifieri278992 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces
Proteomesi
  • UP000061018 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3333Sequence analysisAdd
BLAST
Chaini34 – 950917Sequence analysisPRO_5007183938Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini500 – 58182PKDInterPro annotationAdd
BLAST
Domaini693 – 818126CBM6 (carbohydrate binding type-6)InterPro annotationAdd
BLAST
Domaini820 – 950131Ricin B-type lectinInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.60.120.260. 1 hit.
2.60.40.670. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR006584. Cellulose-bd_IV.
IPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR012938. Glc/Sorbosone_DH.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
IPR011041. Quinoprot_gluc/sorb_DH.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03422. CBM_6. 1 hit.
PF07995. GSDH. 1 hit.
PF00801. PKD. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00606. CBD_IV. 1 hit.
SM00089. PKD. 1 hit.
SM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF50370. SSF50370. 1 hit.
SSF50952. SSF50952. 2 hits.
PROSITEiPS51175. CBM6. 1 hit.
PS50093. PKD. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0ACX1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTRPRGHRR VRSLLPALAC AIGLALPMSP ATAAPAEPGG AAEAAAAEEF
60 70 80 90 100
QQVTLAKGVA ETGEPMTLAV LPDRSVLHTS RDGTLRLTDP AGNTAVAGKL
110 120 130 140 150
DVYSHDEEGL QGVAADPGFR TNRFVYLYYA PKLSTPAGDA PADGTAADFA
160 170 180 190 200
PFDGVNRLSR FVLRTDGTLD TGSEKKILDV PASRGLCCHV GGDIDFDAAG
210 220 230 240 250
NLYLSTGDDT NPFASDGYTP IDERASRNPA YDAQRSSGNT NDLRGKILRI
260 270 280 290 300
KVNADGSYGI PSGNLFAPGT ARTRPEIYAM GFRNPFRMSV DKATGTVYVG
310 320 330 340 350
DYGPDAGTAS ASRGPAGQVE FNRVTKAGNF GWPYCTGDND AYVDHDFASG
360 370 380 390 400
ASGAAFNCAA PKNTSPRNTG LTDLPPVQPA WIPYDGGSVP EFGNGSESPM
410 420 430 440 450
GGPVYRYDAN STSEVKFPEE YDGDFFAGEF GRRWIKRVEA GGDGTVQSIN
460 470 480 490 500
SFPWSGTQVM DMAFGPDGAL YVLDYGTGYF NGDANSALYR IEHVTGGHAP
510 520 530 540 550
VAQAGANTTS GKAPLAVTFS SAGSSDADGD ALTHSWDFGD GATSTQANPS
560 570 580 590 600
HTYATNGQYT ATLKVTDTTG KSATASVRIT VGNTAPTVRL DLPADGSVYD
610 620 630 640 650
FGAAIPFKVT VTDPEDGTID CAKVKVTFIV GHDSHGHPQT SATGCTGTLR
660 670 680 690 700
TLADGEHDPN ANIFGVIDAE YTDKGANGQP ALTTHDQHIT QPSHRQAEHY
710 720 730 740 750
GNSSGVQVVT HTPAHGGRTV GHIENGDWIS FQPYALGNTT TFTARVSSAG
760 770 780 790 800
TGGTIEVRAG SPTGTLLGTA TVPVTGGWET FQDVTAALSN QPTGSTTLHL
810 820 830 840 850
VFKGGSGSLF DVDEFSFSTS GGSSRTGAVK GVNGKCLDVD NAGTADGTKV
860 870 880 890 900
QVWTCNGSAA QSWTVAGDGA LKALGKCLDV SGGGTADGTK VQLWTCNGSG
910 920 930 940 950
AQQWAAQSDG TVRNPQSGKC LDASGGTWND GTAVHLWSCH TGPNQKWTLP
Length:950
Mass (Da):98,597
Last modified:November 28, 2006 - v1
Checksum:iC26B9A523DCF8006
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012382 Genomic DNA. Translation: AKZ60012.1.
AM238664 Genomic DNA. Translation: CAJ88326.1.
RefSeqiWP_053141220.1. NZ_CP012382.1.

Genome annotation databases

KEGGisamb:SAM23877_6967.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012382 Genomic DNA. Translation: AKZ60012.1.
AM238664 Genomic DNA. Translation: CAJ88326.1.
RefSeqiWP_053141220.1. NZ_CP012382.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13. Carbohydrate-Binding Module Family 13.
CBM6. Carbohydrate-Binding Module Family 6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGisamb:SAM23877_6967.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.60.120.260. 1 hit.
2.60.40.670. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR006584. Cellulose-bd_IV.
IPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR012938. Glc/Sorbosone_DH.
IPR022409. PKD/Chitinase_dom.
IPR000601. PKD_dom.
IPR011041. Quinoprot_gluc/sorb_DH.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF03422. CBM_6. 1 hit.
PF07995. GSDH. 1 hit.
PF00801. PKD. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00606. CBD_IV. 1 hit.
SM00089. PKD. 1 hit.
SM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF50370. SSF50370. 1 hit.
SSF50952. SSF50952. 2 hits.
PROSITEiPS51175. CBM6. 1 hit.
PS50093. PKD. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Multiple biosynthetic and uptake systems mediate siderophore-dependent iron acquisition in Streptomyces coelicolor A3(2) and Streptomyces ambofaciens ATCC 23877."
    Barona-Gomez F., Lautru S., Francou F.X., Leblond P., Pernodet J.L., Challis G.L.
    Microbiology (Mosc.) 152:3355-3366(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 23877Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 23877Imported.
  3. "Complete genome sequence of Streptomyces ambofaciens ATCC 23877, the spiramycin producer."
    Thibessard A., Haas D., Gerbaud C., Aigle B., Lautru S., Pernodet J.-L., Leblond P.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23877Imported.

Entry informationi

Entry nameiA0ACX1_STRAM
AccessioniPrimary (citable) accession number: A0ACX1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: May 11, 2016
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.