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Protein
Submitted name:

Putative GntR-family transcriptional regulator

Gene

SAM23877_7025

Organism
Streptomyces ambofaciens ATCC 23877
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative GntR-family transcriptional regulatorImported
Gene namesi
ORF Names:SAM23877_7025Imported, SAMR0564Imported
OrganismiStreptomyces ambofaciens ATCC 23877Imported
Taxonomic identifieri278992 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 1001973Sequence analysisPRO_5006452204Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini674 – 803130CBM6 (carbohydrate binding type-6)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.60.120.260. 1 hit.
3.90.182.10. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR005084. CMB_fam6.
IPR010496. DUF1080.
IPR008979. Galactose-bd-like.
IPR011658. PA14_dom.
[Graphical view]
PfamiPF16990. CBM_35. 1 hit.
PF06439. DUF1080. 1 hit.
PF07691. PA14. 1 hit.
[Graphical view]
SMARTiSM00758. PA14. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A0ACR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQRLFSRAR RNLTLLLTSA VATGGVLAAP ASAAPDDIPP QEPGVTLRVF
60 70 80 90 100
DVQTPLNELC TLKAGQTPNH DELMPTVDWS TTEDFGGIAD NFVSQASGYL
110 120 130 140 150
VAPRDGTYVF RLTSDDGSRL TLDQATVIDH DGLHGAEPKD GAVDLTAGTH
160 170 180 190 200
PLRIDHFDRG GGQQLQLSWK PPGESEFSVV PREALSTDAG VVRVTAPGRK
210 220 230 240 250
ECEAGRDTPG DGLPLTSVRP DLTLTDLRPD GFEPQVSGMD WLPDGRLAIS
260 270 280 290 300
TWGGTDNVAG EVYLLDNVTG ATSRDKVTVK KVASGLREPM GIKYVDGSLY
310 320 330 340 350
VSQKHELTRL VDGNGDDVAD ELRTVATWPY GGNFHEFAFG LLYRDGYFYV
360 370 380 390 400
NLSVAIDLGG ATTTPQPAPG RGTTYKISKK TGKISPVAGG LRTPNGIGWG
410 420 430 440 450
PDGDIFATDN QGGWLPASKL VQVEQDRFFN HYTEPAGPFE DSPVTKPVLW
460 470 480 490 500
LPQNEIGNSP STPLLVKKGT FAGQMLIGDV TYGGLQRAYL EKVKGQYQGA
510 520 530 540 550
VFRYTQGLEA GVNRISVGPD GAIYAGGLGA DGNWGQEGKL KFGLQKLTPN
560 570 580 590 600
GGDTFDIQRM RAVPGGFDLT YTQPVSAETA AELAARYEAE QWRYTPTADY
610 620 630 640 650
GGPKIAEEQL SVRSATLSRD ARTVRLRLDG LKPDRVVHVR SPRPFSSASG
660 670 680 690 700
ESLWSTEAWY TLNAMPGKQP PAATLYEAEE AGLTGTAGIG TDHVGYSGSG
710 720 730 740 750
FVDQYATEGK AATTFDVTVP RSGTYDVNLR YSNGPNPFEG TKSLSLYANG
760 770 780 790 800
KKVRQTHLAS TGDWDTWSTR TERLRLRAGH NTVSYRYDAG DAGHVNLDLI
810 820 830 840 850
TVHPHGARVA LFDGTAASQE QWQHTDGRRT AWPLSEERSM EVCCGDLRTK
860 870 880 890 900
DAYRDFALHV EFRVPLLPPD VTGQDRGNSG IFLQDRYELQ ILDSYGDTSP
910 920 930 940 950
ATNEAGAFYQ KKAPDINAAA APETWQTYDI VFRAARYDED GAKTADARVT
960 970 980 990 1000
VVWNGKKVHD DIALDGPTAS GRAETPAAGA IRLQDHGNKV RFRNIRIEPL

D
Length:1,001
Mass (Da):108,287
Last modified:November 28, 2006 - v1
Checksum:iB527ABFF21FAC67B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012382 Genomic DNA. Translation: AKZ60070.1.
AM238664 Genomic DNA. Translation: CAJ88274.1.
RefSeqiWP_053141319.1. NZ_CP012382.1.

Genome annotation databases

KEGGisamb:SAM23877_7025.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP012382 Genomic DNA. Translation: AKZ60070.1.
AM238664 Genomic DNA. Translation: CAJ88274.1.
RefSeqiWP_053141319.1. NZ_CP012382.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

KEGGisamb:SAM23877_7025.

Family and domain databases

Gene3Di2.120.10.30. 1 hit.
2.60.120.260. 1 hit.
3.90.182.10. 1 hit.
InterProiIPR011042. 6-blade_b-propeller_TolB-like.
IPR005084. CMB_fam6.
IPR010496. DUF1080.
IPR008979. Galactose-bd-like.
IPR011658. PA14_dom.
[Graphical view]
PfamiPF16990. CBM_35. 1 hit.
PF06439. DUF1080. 1 hit.
PF07691. PA14. 1 hit.
[Graphical view]
SMARTiSM00758. PA14. 1 hit.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Multiple biosynthetic and uptake systems mediate siderophore-dependent iron acquisition in Streptomyces coelicolor A3(2) and Streptomyces ambofaciens ATCC 23877."
    Barona-Gomez F., Lautru S., Francou F.X., Leblond P., Pernodet J.L., Challis G.L.
    Microbiology (Mosc.) 152:3355-3366(2006)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 23877Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 23877Imported.
  3. "Complete genome sequence of Streptomyces ambofaciens ATCC 23877, the spiramycin producer."
    Thibessard A., Haas D., Gerbaud C., Aigle B., Lautru S., Pernodet J.-L., Leblond P.
    Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ATCC 23877Imported.

Entry informationi

Entry nameiA0ACR9_STRAM
AccessioniPrimary (citable) accession number: A0ACR9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 28, 2006
Last sequence update: November 28, 2006
Last modified: February 17, 2016
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.