A0A2K8 (A0A2K8_9HEPC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: NS5B EMBL ABJ53302.1
Organism	Hepatitis C virus EMBL ABJ53302.1
Taxonomic identifier	11103 [NCBI]
Taxonomic lineage	Viruses › ssRNA viruses › ssRNA positive-strand viruses, no DNA stage › Flaviviridae › Hepacivirus

Protein attributes

Sequence length	84 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). SAAS SAAS002166
Sequence similarities	Contains 1 RdRp catalytic domain. SAAS SAAS002166

Ontologies

Keywords
Biological process	Viral RNA replication SAAS SAAS002166
Ligand	Nucleotide-binding SAAS SAAS002166
Molecular function	Nucleotidyltransferase RNA-directed RNA polymerase SAAS SAAS002166 Transferase
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro viral genome replication Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro RNA binding Inferred from electronic annotation. Source: InterPro RNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL ABJ53302.1
	Non-terminal residue	84	1	EMBL ABJ53302.1

Sequences

	Sequence		Length	Mass (Da)
	A0A2K8 [UniParc]. Last modified November 14, 2006. Version 1. Checksum: 7E15E24E10954B64	FASTA	84	9,267
	10 20 30 40 50 60 VHDSTVTEQD IRVEEEIYQC CNLEPEARKV ISSLTERLYC GGPMFNSKGA QCGYRRCRAS 70 80 GVLPTSFGNT ITCYIKATAA AKDI

References

[1]	"Sequence of Hepatitis C virus NS5B gene." Kumar D., Malik A., Asim M., Chakaravarty A., Das R.H., Kar P. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 19 EMBL ABJ53302.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EF015717 mRNA. Translation: ABJ53302.1.
3D structure databases
ProteinModelPortal	A0A2K8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
euHCVdb	EF015717.
Family and domain databases
InterPro	IPR007094. RNA-dir_pol_PSvirus. IPR002166. RNA_pol_HCV. [Graphical view]
Pfam	PF00998. RdRP_3. 1 hit. [Graphical view]
PROSITE	PS50507. RDRP_SSRNA_POS. 1 hit. [Graphical view]
ProtoNet	Search...
Other
BindingDB	A0A2K8.

Entry information

Entry name

A0A2K8_9HEPC

Accession

Primary (citable) accession number: A0A2K8

Entry history

Integrated into UniProtKB/TrEMBL:	November 14, 2006
Last sequence update:	November 14, 2006
Last modified:	March 6, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)