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Protein
Submitted name:

NLRP6 isoform 2

Gene

CK820_G0044189

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywordsi

LigandATP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
NLRP6 isoform 2Imported
Gene namesi
ORF Names:CK820_G0044189Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000236370 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 103PyrinInterPro annotationAdd BLAST103
Domaini197 – 514NACHTInterPro annotationAdd BLAST318

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili80 – 100Sequence analysisAdd BLAST21
Coiled coili459 – 479Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, RepeatSAAS annotation

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR004020 DAPIN
IPR011029 DEATH-like_dom_sf
IPR032675 LRR_dom_sf
IPR007111 NACHT_NTPase
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF02758 PYRIN, 1 hit
SMARTiView protein in SMART
SM01289 PYRIN, 1 hit
SUPFAMiSSF47986 SSF47986, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50824 DAPIN, 1 hit
PS50837 NACHT, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2J8JW32-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDQPEAPCSS TGPRLAVARE LLLAALEELS QEQLKRFRHK LRDVGPDGRS
60 70 80 90 100
IPWGRLERAD AVDLAEQLAQ FYGPEPALEV ARKTLKRADA RDVAAQLQEQ
110 120 130 140 150
RLQRLGLGSG TLLSVSEYKK KYREHVLQLH ARVKERNARS VKITKRFTKL
160 170 180 190 200
LIAPESAAPE EEALGPAEEP EPGRARRSDT HTFNRLFRRD EEGRRPLTVV
210 220 230 240 250
LQGPAGIGKT MAAKKILYDW AAGKLYQGQV DFAFFLPCGE LLERPGTRSL
260 270 280 290 300
ADLILDQCPD RGAPVPQMLA QPQRLLFILD GADELPALGG PEAAPCTDPF
310 320 330 340 350
EAASGARVLG GLLSKALLPT ALLLVTTRAA APGRLQGRLC SPQCAEVRGF
360 370 380 390 400
SDKDKKKYFY KFFRDERRAE RAYRFVKENE TLFALCFVPF VCWIVCTVLR
410 420 430 440 450
QQLELGRDLS RTSKTTTSVY LLFITSVLSS APVADGPRLQ GDLRNLCRLA
460 470 480 490 500
REGVLGRRAQ FAEKELEQLE LRGSKVQTLF LSKKELPGVL ETEVTYQFID
510 520 530 540 550
QSFQEFLAAL SYLLEDGGVP RTAAGGVGTL LRGDTQPHSH LVLTTRFLFG
560 570 580 590 600
LLSAERMRDI QRHFGCMVSE RVKQEALRWV QGQGQGCPGV APEVTEGAKG
610 620 630 640 650
LEDTEEPEEE EEGEEPNYPL ELLYCLYETQ EDAFVRQALC GLPELALQRV
660 670 680 690 700
RFCRMDVAVL SYCVRCCPAG QALRLISCRL VAAQEKKKKS LGKRLQASLG
710 720 730 740 750
GSSSSRGTTK QLPASLLHPL FQAMTDPLCH LSSLTLSHCK LPDAVCRDLS
760 770 780 790 800
EALRAAPALT ELGLLHNRLS EAGLRMLTEG LAWPQCRVQT VRVQLPDPQR
810 820 830 840 850
GLQYLVSVLR QSPALTTLDL SGCQLPAPMV TYLCAVLQHQ GCGLQTLSLA
860 870 880 890
SVELSEQSLQ ELQAVKRAKP DLVITHPALD GHPQPPKELI STF
Length:893
Mass (Da):98,783
Last modified:March 28, 2018 - v1
Checksum:iAA76F0835F0610DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
NBAG03000421 Genomic DNA Translation: PNI26977.1
RefSeqiXP_016775432.1, XM_016919943.1

Genome annotation databases

GeneIDi466301

Similar proteinsi

Entry informationi

Entry nameiA0A2J8JW32_PANTR
AccessioniPrimary (citable) accession number: A0A2J8JW32
Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: April 25, 2018
This is version 2 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health