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Protein
Submitted name:

LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 10

Gene

dcaf10

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 10Imported
Gene namesi
Name:dcaf10Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini135 – 261WD_REPEATS_REGIONInterPro annotationAdd BLAST127
Repeati178 – 211WDPROSITE-ProRule annotationAdd BLAST34
Repeati220 – 252WDPROSITE-ProRule annotationAdd BLAST33

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 2 hits
SMARTiView protein in SMART
SM00320 WD40, 5 hits
SUPFAMiSSF50978 SSF50978, 2 hits
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 2 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I4C0H3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSEHQSGSE DADESQDRPD NTGTVSDKDE DPDIDESDEE DDNARRVSSL
60 70 80 90 100
PPGSSEDQPE HSAGSPAAEK LEPRCSAADK PQSGSGGSRG DSLFSWLRSR
110 120 130 140 150
TTRRGLFVDP ARDNFRTMTS LYSSMNPAVE SVNLSTQTHG AVFNLEYSPD
160 170 180 190 200
GSVLTVACEQ TEVLLFDPVS SRHIRTLTEA HEDCVNNIRF LDNRLFATCS
210 220 230 240 250
DDTTIALWDL RKLNSKVCSL HGHASWVKNI EYDTNTRLLV TSGFDGNVIT
260 270 280 290 300
WDTNRFTEDG CPHKKFFHTR YLMRMRLTPD CSKMLISTSS GYLLILHDLD
310 320 330 340 350
LTQSLEVGSY RMLRARRTPL SSDXGTSASR SSATSRHGND SSKIHPHREG
360 370 380 390 400
LSPRNSLEVL TPEIPGEKDR GNCITSLQLH PKGWATLIRC SSNMDDQEWT
410 420 430 440 450
CVYEFQEGAP TRPLVSPRCS LRLTHYIEEA NVGRGYIKEL CFSPDGRLIC
460 470 480 490 500
SPYGYGVRLL AFNERCGELA DCLPVQTSCL REIRSIYSHS DVVLTTKFSP
510 520
THCQLASGCL SGRVALYQPK F
Length:521
Mass (Da):57,981
Last modified:February 28, 2018 - v1
Checksum:i9B380D7AA90C4743
GO

Sequence databases

RefSeqiXP_013873492.1, XM_014018038.1

Genome annotation databases

GeneIDi106524294

Similar proteinsi

Entry informationi

Entry nameiA0A2I4C0H3_9TELE
AccessioniPrimary (citable) accession number: A0A2I4C0H3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: May 23, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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