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Protein
Submitted name:

nephrocystin-3 isoform X1

Gene

nphp3

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
nephrocystin-3 isoform X1Imported
Gene namesi
Name:nphp3Imported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini920 – 1271TPR_REGIONInterPro annotationAdd BLAST352
Repeati920 – 953TPRPROSITE-ProRule annotationAdd BLAST34
Repeati962 – 995TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1004 – 1037TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1070 – 1103TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1112 – 1145TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1154 – 1187TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1196 – 1229TPRPROSITE-ProRule annotationAdd BLAST34
Repeati1238 – 1271TPRPROSITE-ProRule annotationAdd BLAST34

Keywords - Domaini

TPR repeatPROSITE-ProRule annotation

Family and domain databases

Gene3Di1.25.40.10, 3 hits
InterProiView protein in InterPro
IPR027417 P-loop_NTPase
IPR013026 TPR-contain_dom
IPR011990 TPR-like_helical_dom_sf
IPR019734 TPR_repeat
PfamiView protein in Pfam
PF13176 TPR_7, 1 hit
SMARTiView protein in SMART
SM00028 TPR, 8 hits
SUPFAMiSSF48452 SSF48452, 2 hits
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS50005 TPR, 8 hits
PS50293 TPR_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I4BM54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGTASSLVSP GGEVIEDGYG GDGGEACEIP VEVKPKARLL RSSFRRGPRV
60 70 80 90 100
IGASFKSTGS VDLEYAAEYE RLRKEYEIFR VSKNNEVASM QRKEAKLDEE
110 120 130 140 150
NKRLRAELQA LQKTYQKILR EKEAALEAKY QAMERAVTVE HDRDKVKRQF
160 170 180 190 200
KIFRETKEKE IQDLLRAKRD LEAKLQQLQS QGIYVYSPNG SDSDDNQTTV
210 220 230 240 250
TAGGTQCEYW TGGVLGSEPS MGSMMQLQQT FRGPEFAHSL IDVEGPFANV
260 270 280 290 300
SRDDWDAAVA SLLQVSPHVP QALWSNTVRC YLISTQDTKA ELDIFIKKHS
310 320 330 340 350
SELRQMCECL GHFYLNVYFP EETAASYITE RKQEIEKSSV CVLLLKSTVT
360 370 380 390 400
SSVIEDCEEA FVRNLDGHSL VLYLRTEGDG GLTEPIRQLL EKVNTADKAA
410 420 430 440 450
KVKVVDHSGL AEDGANLIYT QLKKVIKQEL LGFEGADADS KDAVVDEGHE
460 470 480 490 500
EDSGDVLWDL HDEQEQIESY QQACNSTASQ LGFQKYIDRL NDMIAAPPPT
510 520 530 540 550
PPLLVSGGPG SGKSLLLSKW VELQQKQSPN SLFLYHFVGR PLSTSSEPVL
560 570 580 590 600
IIKRLTVKLL QHFWSLSGLT MDPSKTLEEF PRWLERLSAR HQGNIIIIID
610 620 630 640 650
SIDQIHQAER HMKWLIDPLP VNVRVVVSVN VETCPQAWRL WPTLHLDPLS
660 670 680 690 700
PREVKSVVTA ECQSMGLKLT KDQEKKLERH CRSASTCNAS YVTLLARMIA
710 720 730 740 750
SDRCDLSLEK SLEQCLLCQD SMSLYRLALN MTLRSLSTDT ERRVMKEMLC
760 770 780 790 800
LVFASHNGVS ESEILDFFPE LELPVLSFLL HRLNRLCITT LRCGLVTFQH
810 820 830 840 850
LQACEAVRLE FLSGGSSSAS YREKLIHYFS QQLSQDRVTW RVADELPWLL
860 870 880 890 900
QQQEEQTKLQ LCLLNLFVSQ NLYKRGHFSE LLAYWQHVGK DKSSMATEYF
910 920 930 940 950
DSLKNYEKSC ESEEDMTKLA NLYETLGRFL KDLGLPSQAV APLHRSLEIR
960 970 980 990 1000
ETALDPDHPS VARSLHQLAG VYVKWKKYGN AEQLYKQALE ISENAFGAEH
1010 1020 1030 1040 1050
PSVARELESL AVLYQKQNKY EQAEKLKKRS VKIRQKTARQ KGHMYGFTLL
1060 1070 1080 1090 1100
RRRALQLEEL TLGKDSADSA KTLNELGVLY YLQNNLDAAK VFLTRSLEMR
1110 1120 1130 1140 1150
QRVFGPDHPD CAQSLNNLAA LHTERREYET AEDMYERALE IRKKALSPDH
1160 1170 1180 1190 1200
PSLAYTLKHL AMLYKRRGKL EKAVPLYELS LEIREKSFGP KHPSVATALV
1210 1220 1230 1240 1250
NLAVIYCQLK KHSEALPLYE RALKVYENSL GRSHPRVGET LKNLAVLSFE
1260 1270 1280 1290 1300
RGDFERAAEL YKRAMEIKEA EPSLVCGNAP SRHSSSGDTF SVKGPAPLPH

APR
Length:1,303
Mass (Da):147,546
Last modified:February 28, 2018 - v1
Checksum:iFAE1A4C31C14AEB8
GO

Sequence databases

RefSeqiXP_013868831.1, XM_014013377.1

Genome annotation databases

GeneIDi106521006

Similar proteinsi

Entry informationi

Entry nameiA0A2I4BM54_9TELE
AccessioniPrimary (citable) accession number: A0A2I4BM54
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: April 25, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health