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Protein
Submitted name:

myocyte-specific enhancer factor 2C isoform X5

Gene

mef2c

Organism
Austrofundulus limnaeus
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
myocyte-specific enhancer factor 2C isoform X5Imported
Gene namesi
Name:mef2cImported
OrganismiAustrofundulus limnaeusImported
Taxonomic identifieri52670 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesRivulidaeAustrofundulus
Proteomesi
  • UP000192220 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR022102 HJURP_C
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF12347 HJURP_C, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2I4B802-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS
60 70 80 90 100
TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVEALNK KENKGXESPE
110 120 130 140 150
LESALILTPR TEEKYKQINE EFDHMIKTHK IPQAVPPSNY DMPVSIPASN
160 170 180 190 200
QNNLIYSHPG GSLSNHNLLP LAHHGLQRNS MSPGVTHRPP SAGGLMGADL
210 220 230 240 250
TTGAGTSAGN GYGNHRNSPG LLVSTGGMNK NMQAKSPPPM NLGMNNRKPD
260 270 280 290 300
LRVLIPPGAK NNMPSINQRI NSSQSAQSLA TPVVSVATPT LPGQGMGGYP
310 320 330 340 350
SAISTSYGTE YSLNSADLSS LSGFNSGSSL HLGSMSGWQQ QHLQNMQHSA
360 370 380 390 400
LSQLGNCSSS HLCQGSNLSL PSAQSLHIKS EPVSPPRDRT SSTPGGYGGG
410 420 430 440 450
VPPPQNPASR QDSGRSPVDS LSSCSSSHEG SDRDDHRNEF HSPLGLARPT
460 470
LDERESPSIK RVRLSEGWAT
Length:470
Mass (Da):50,798
Last modified:February 28, 2018 - v1
Checksum:i2A3C8FC4FA626E01
GO

Sequence databases

RefSeqiXP_013863838.1, XM_014008384.1

Genome annotation databases

GeneIDi106517503

Similar proteinsi

Entry informationi

Entry nameiA0A2I4B802_9TELE
AccessioniPrimary (citable) accession number: A0A2I4B802
Entry historyiIntegrated into UniProtKB/TrEMBL: February 28, 2018
Last sequence update: February 28, 2018
Last modified: April 25, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health