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Protein

30S ribosomal protein S4

Gene

rpsD

Organism
Chlamydia trachomatis
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.UniRule annotation
With S5 and S12 plays an important role in translational accuracy.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S4UniRule annotation
Gene namesi
Name:rpsDUniRule annotation
ORF Names:BKB91_03410Imported
OrganismiChlamydia trachomatisImported
Taxonomic identifieri813 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts protein S5. The interaction surface between S4 and S5 is involved in control of translational fidelity.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini93 – 154S4 RNA-bindingInterPro annotationAdd BLAST62

Sequence similaritiesi

Belongs to the universal ribosomal protein uS4 family.UniRule annotation

Family and domain databases

CDDicd00165. S4. 1 hit.
Gene3Di3.10.290.10. 1 hit.
HAMAPiMF_01306_B. Ribosomal_S4_B. 1 hit.
InterProiView protein in InterPro
IPR022801. Ribosomal_S4/S9.
IPR001912. Ribosomal_S4/S9_N.
IPR005709. Ribosomal_S4_bac-type.
IPR002942. S4_RNA-bd.
IPR036986. S4_RNA-bd_sf.
PANTHERiPTHR11831. PTHR11831. 1 hit.
PTHR11831:SF4. PTHR11831:SF4. 1 hit.
PfamiView protein in Pfam
PF00163. Ribosomal_S4. 1 hit.
PF01479. S4. 1 hit.
SMARTiView protein in SMART
SM01390. Ribosomal_S4. 1 hit.
SM00363. S4. 1 hit.
TIGRFAMsiTIGR01017. rpsD_bact. 1 hit.
PROSITEiView protein in PROSITE
PS50889. S4. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A2D3SIR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARYCGPKNR IARRFGANIF GRGRNPLLRK PNPPGQHGMQ RKKKSDYGLQ
60 70 80 90 100
LEEKQKLKAC YGMILEKQLV KAYEEVVNKQ GNVAQMFLEK FECRLDNIVY
110 120 130 140 150
RLGFAKTIFA AQQLVSHGHV LVNGKKVDRR SFFVRPRMQI SLKEKSKRLA
160 170 180 190 200
IVTESLENKD QSSLPAYLSL DKAAFKGELV VAPELDQIAS QLPLPVNVSV

ICEFLSHRT
Length:209
Mass (Da):23,787
Last modified:January 31, 2018 - v1
Checksum:i552DF5504FD0C3DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP017742 Genomic DNA. Translation: ATW17620.1.

Similar proteinsi

Entry informationi

Entry nameiA0A2D3SIR9_CHLTH
AccessioniPrimary (citable) accession number: A0A2D3SIR9
Entry historyiIntegrated into UniProtKB/TrEMBL: January 31, 2018
Last sequence update: January 31, 2018
Last modified: March 28, 2018
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)