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Protein
Submitted name:

transmembrane protein 198 isoform X1

Gene

tm198

Organism
Ictalurus punctatus (Channel catfish) (Silurus punctatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
transmembrane protein 198 isoform X1Imported
Gene namesi
Name:tm198Imported
OrganismiIctalurus punctatus (Channel catfish) (Silurus punctatus)Imported
Taxonomic identifieri7998 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiSiluriformesIctaluridaeIctalurus
Proteomesi
  • UP000221080 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei32 – 51HelicalSequence analysisAdd BLAST20
Transmembranei58 – 75HelicalSequence analysisAdd BLAST18
Transmembranei95 – 116HelicalSequence analysisAdd BLAST22
Transmembranei121 – 137HelicalSequence analysisAdd BLAST17
Transmembranei143 – 164HelicalSequence analysisAdd BLAST22
Transmembranei171 – 192HelicalSequence analysisAdd BLAST22
Transmembranei212 – 231HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 232DUF4203InterPro annotationAdd BLAST197

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR025256 DUF4203
PfamiView protein in Pfam
PF13886 DUF4203, 1 hit

Sequencei

Sequence statusi: Complete.

A0A2D0QV50-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADPSMLVTE GVMPTLASTD SCVLEVRKKY EVIPSVACTM CFILGIVYCF
60 70 80 90 100
CGYRCFKLVM FLSGLSFGTG IGYLLCLREQ LMDSPLDPET RAGISLGIGL
110 120 130 140 150
LGGLVSILVR CVGLFLTGLQ LGLLFSITAL LTAGQYYPIL SPVWVPAGTV
160 170 180 190 200
LGTGIFFAVL TLCWQRSMTM VATATLGAAI IMTCMDYCME TPMMAWRAYV
210 220 230 240 250
GLQKDQEKVL CWYSWVMLGI WPGIAALGNL VQRKFTAKGM SHSEVIASGK
260 270 280 290 300
QKQLQLMKIR QVDARRRPEG KYRRRPPLLK RYTGDVLAPS YLANLRERQM
310 320 330
STGSSVSSLS TVYHTMIDFD FETGSMVPLT PSSPAAIRV
Length:339
Mass (Da):37,250
Last modified:December 20, 2017 - v1
Checksum:i7EF3F40D6C6AB5D3
GO

Sequence databases

RefSeqiXP_017322297.1, XM_017466808.1
XP_017322298.1, XM_017466809.1
UniGeneiIpu.21920

Genome annotation databases

GeneIDi100528094

Similar proteinsi

Entry informationi

Entry nameiA0A2D0QV50_ICTPU
AccessioniPrimary (citable) accession number: A0A2D0QV50
Entry historyiIntegrated into UniProtKB/TrEMBL: December 20, 2017
Last sequence update: December 20, 2017
Last modified: April 25, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health