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Protein
Submitted name:

Cell adhesion molecule 3

Gene

CADM3

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Cell adhesion molecule 3Imported
Gene namesi
Name:CADM3Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei361 – 388HelicalSequence analysisAdd BLAST28

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_501147144423 – 430Sequence analysisAdd BLAST408

Keywords - PTMi

Disulfide bondSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 144Ig-likeInterPro annotationAdd BLAST90
Domaini162 – 260Ig-likeInterPro annotationAdd BLAST99
Domaini265 – 347Ig-likeInterPro annotationAdd BLAST83

Keywords - Domaini

Immunoglobulin domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00900000140811.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
InterProiView protein in InterPro
IPR013162. CD80_C2-set.
IPR007110. Ig-like_dom.
IPR036179. Ig-like_dom_sf.
IPR013783. Ig-like_fold.
IPR013098. Ig_I-set.
IPR003599. Ig_sub.
IPR003598. Ig_sub2.
IPR003585. Neurexin-like.
PfamiView protein in Pfam
PF08205. C2-set_2. 1 hit.
PF07679. I-set. 1 hit.
SMARTiView protein in SMART
SM00294. 4.1m. 1 hit.
SM00409. IG. 3 hits.
SM00408. IGc2. 3 hits.
SUPFAMiSSF48726. SSF48726. 3 hits.
PROSITEiView protein in PROSITE
PS50835. IG_LIKE. 3 hits.

Sequencei

Sequence statusi: Complete.

A0A287CSP2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAPSALALL LLLACCWAPG GANLSQDGYW QEQDLELGTL APLDEPISST
60 70 80 90 100
VWSSPDMLAS QDSQPWTSDE TVVAGGTVVL KCQVKDHEDS SLQWSNPAQQ
110 120 130 140 150
TLYFGEKRAL RDNRIQLVSS TPHELSISIS NVALADEGEY TCSIFTMPVR
160 170 180 190 200
TAKSLVTVLG IPQKPIITGY KSSLREKDTM TLNCHSSGSK PAAQLTWRKG
210 220 230 240 250
DQELHGEPTR IQEDSNGKTF TVSSSVTLQV TREDDGADIV CSVNHESLKG
260 270 280 290 300
ADRSTSQHIE VLYTPTAMIR PDPPHPREGQ KLSLHCEGRG NPVPQKYLWM
310 320 330 340 350
KEGSDPPLKT TQESALIFPF LNKSDSGIYG CTAISNMGSY TAYFTLNVND
360 370 380 390 400
PSPVPSSSST YHAIIGGIVA FIVFLLLILL IFLGHYLIRH KGTYLTHEAK
410 420 430
GSDDAPDADT AIINAEGGQS GGDDKKEYFI
Length:430
Mass (Da):46,704
Last modified:November 22, 2017 - v1
Checksum:i63E0763CBCFFF26F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01101635 Genomic DNA. No translation available.
AGTP01101636 Genomic DNA. No translation available.
AGTP01101637 Genomic DNA. No translation available.
RefSeqiXP_005339450.1. XM_005339393.2.

Genome annotation databases

EnsembliENSSTOT00000037793; ENSSTOP00000024283; ENSSTOG00000025214.
GeneIDi101971669.

Similar proteinsi

Entry informationi

Entry nameiA0A287CSP2_ICTTR
AccessioniPrimary (citable) accession number: A0A287CSP2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported