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Protein
Submitted name:

Sorting nexin-1

Gene

SNX1

Organism
Castor canadensis (Beaver)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sorting nexin-1Imported
Gene namesi
Name:SNX1Imported
OrganismiCastor canadensis (Beaver)Imported
Taxonomic identifieri51338 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaCastorimorphaCastoridaeCastor

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini143 – 272PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili363 – 383Sequence analysisAdd BLAST21
Coiled coili446 – 466Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

CDDicd07281 PX_SNX1, 1 hit
Gene3Di1.20.1270.60, 1 hit
3.30.1520.10, 1 hit
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR001683 Phox
IPR036871 PX_dom_sf
IPR034901 PX_SNX1
IPR028660 SNX1
IPR005329 Sorting_nexin_N
IPR015404 Vps5_C
PANTHERiPTHR10555:SF129 PTHR10555:SF129, 1 hit
PfamiView protein in Pfam
PF00787 PX, 1 hit
PF03700 Sorting_nexin, 1 hit
PF09325 Vps5, 1 hit
SMARTiView protein in SMART
SM00312 PX, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF64268 SSF64268, 1 hit
PROSITEiView protein in PROSITE
PS50195 PX, 1 hit

Sequencei

Sequence statusi: Complete.

A0A250Y2C4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASGGGGCSA SGRLPPPFPG LDPESEGAAG GSEPEAGDSD TEGEDIFTGA
60 70 80 90 100
AAANKPQSPK RTASLLPINS SSKENGIHEE QDQEPQDLFA DATVELSLDS
110 120 130 140 150
TQNNQKKVPA KMLVPVPPQE ATSSSKSQLS YEELEEEEQE DQFDLTVGIT
160 170 180 190 200
DPEKIGDGMN AYVAYKVTTQ TSLPMFRSKQ FAVKRRFSDF LGLYEKLSEK
210 220 230 240 250
HSQNGFIVPP PPEKSLIGMT KVKVGKEDSS SAEFLEKRRA ALERYLQRVV
260 270 280 290 300
NHPTMLQDPD VREFLEKEEL PRAVGTQTLS GAGLLKMFNK ATDAVSKMTI
310 320 330 340 350
KMNESDIWFE EKLQEVECEE QRLRKLHAVV ETLVNHRKEL AVNTAQFAKS
360 370 380 390 400
LAMLGSSEDN TALSRALSQL AEVEEKIEQL HQEQANSDFF LLAELLNDYI
410 420 430 440 450
RLLAIVRAAF DQRMKTWQRW QDAQATLQKK REAEARLLWA NKPDKLQQAK
460 470 480 490 500
DEITEWESRV TQYERDFERI STVVRKEVIR FEKEKSKDFK NHVIKYLETL
510 520
LCSQQQLAKY WEAFLPEAKA IS
Length:522
Mass (Da):58,809
Last modified:November 22, 2017 - v1
Checksum:i1973C7718C3EFC62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GFFV01002194 Transcribed RNA Translation: JAV37751.1
RefSeqiXP_020029668.1, XM_020174079.1

Genome annotation databases

GeneIDi109693045

Similar proteinsi

Entry informationi

Entry nameiA0A250Y2C4_CASCN
AccessioniPrimary (citable) accession number: A0A250Y2C4
Entry historyiIntegrated into UniProtKB/TrEMBL: November 22, 2017
Last sequence update: November 22, 2017
Last modified: February 28, 2018
This is version 4 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health