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Protein

Tubulin alpha chain

Gene

BCR38DRAFT_458799

Organism
Pseudomassariella vexata
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandGTP-bindingUniRule annotationSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Tubulin alpha chainUniRule annotation
Gene namesi
ORF Names:BCR38DRAFT_458799Imported
OrganismiPseudomassariella vexataImported
Taxonomic identifieri1141098 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesXylariomycetidaeXylarialesPseudomassariaceaePseudomassariella
Proteomesi
  • UP000193689 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, CytoskeletonSAAS annotation, MicrotubuleUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.UniRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini50 – 247TubulinInterPro annotationAdd BLAST198
Domaini249 – 399Tubulin_CInterPro annotationAdd BLAST151

Sequence similaritiesi

Belongs to the tubulin family.UniRule annotationSAAS annotation

Family and domain databases

Gene3Di3.30.1330.20. 1 hit.
3.40.50.1440. 1 hit.
InterProiView protein in InterPro
IPR002452. Alpha_tubulin.
IPR008280. Tub_FtsZ_C.
IPR000217. Tubulin.
IPR018316. Tubulin/FtsZ_2-layer-sand-dom.
IPR037103. Tubulin/FtsZ_C_sf.
IPR036525. Tubulin/FtsZ_GTPase_sf.
IPR017975. Tubulin_CS.
IPR003008. Tubulin_FtsZ_GTPase.
PANTHERiPTHR11588. PTHR11588. 1 hit.
PfamiView protein in Pfam
PF00091. Tubulin. 1 hit.
PF03953. Tubulin_C. 1 hit.
PRINTSiPR01162. ALPHATUBULIN.
PR01161. TUBULIN.
SMARTiView protein in SMART
SM00864. Tubulin. 1 hit.
SM00865. Tubulin_C. 1 hit.
SUPFAMiSSF52490. SSF52490. 1 hit.
SSF55307. SSF55307. 1 hit.
PROSITEiView protein in PROSITE
PS00227. TUBULIN. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1Y2DUB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKGEILHVHL GQAGTQLGNS AWELYLLEHG LAHDGRPDPA AKDILDGGSY
60 70 80 90 100
ETFFTETSNG KHVPRAIFCD LDPSPIDEIR TGAYRQLFHP ELLISGKEDA
110 120 130 140 150
ANNYARGHYT IGKEMVESVI DRIRRVADNC NSLQGFLIFH SFGGGTGSGF
160 170 180 190 200
GALLLERLST EYGKKCKLEF AVYPAPRVST AVVEPYNAVL STHSTIENSD
210 220 230 240 250
CTFLVDNEAV YDICRRNLDI PRPSFEHLNR LIAQVVSSIT SSLRFDGALN
260 270 280 290 300
VDLNEFQTNL VPYPRIHYPL ISYAPVVSAS KSAHESFKVH DLTFQCFEPN
310 320 330 340 350
NQMVVCDPRN GKYMAVALLY RGDVVPRDCN SAIAALKAKA SFNLVEWCPT
360 370 380 390 400
GFKLGINYQK PMAVPSTSPN DGGLASVDRS VSMLSNTTAI AEAWSRLDYK
410 420 430 440 450
FDLMYSKRAF VHWYVGEGME EGEFSEARED LAALEKDYEE VAADSTFEGD

EGEAEY
Length:456
Mass (Da):50,533
Last modified:August 30, 2017 - v1
Checksum:i24782677B291493E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
MCFJ01000009 Genomic DNA. Translation: ORY62225.1.

Similar proteinsi

Entry informationi

Entry nameiA0A1Y2DUB0_9PEZI
AccessioniPrimary (citable) accession number: A0A1Y2DUB0
Entry historyiIntegrated into UniProtKB/TrEMBL: August 30, 2017
Last sequence update: August 30, 2017
Last modified: October 25, 2017
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported