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Protein
Submitted name:

sorting nexin-1

Gene

snx1

Organism
Scleropages formosus (Asian bonytongue)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
sorting nexin-1Imported
Gene namesi
Name:snx1Imported
OrganismiScleropages formosus (Asian bonytongue)Imported
Taxonomic identifieri113540 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOsteoglossocephalaOsteoglossomorphaOsteoglossiformesOsteoglossidaeScleropages
Proteomesi
  • UP000192224 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini186 – 315PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili406 – 426Sequence analysisAdd BLAST21
Coiled coili489 – 509Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Gene3Di1.20.1270.60. 1 hit.
3.30.1520.10. 1 hit.
InterProiView protein in InterPro
IPR027267. AH/BAR_dom_sf.
IPR001683. Phox.
IPR036871. PX_dom_sf.
IPR028660. SNX1.
IPR005329. Sorting_nexin_N.
IPR015404. Vps5_C.
PANTHERiPTHR10555:SF129. PTHR10555:SF129. 1 hit.
PfamiView protein in Pfam
PF00787. PX. 1 hit.
PF03700. Sorting_nexin. 2 hits.
PF09325. Vps5. 1 hit.
SMARTiView protein in SMART
SM00312. PX. 1 hit.
SUPFAMiSSF64268. SSF64268. 1 hit.
PROSITEiView protein in PROSITE
PS50195. PX. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1W5B7A2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASSERSPP PFPEGDEQEP EAEPEDGDSD EGEDIFIGNT KPVEIKPSAM
60 70 80 90 100
AREPRSEVTA KGQGDIISDP LGELFPNVVE EPSGALVSEP PTDIFSEEES
110 120 130 140 150
VVTDSKANID PSTISKANGV HSDEEQDLFS EATVELSLDS PRNERKKIEN
160 170 180 190 200
TRPPVAAPTV SVPPSTSKVA SKTLEELEEE EEEDKFELNI SITNPEKVGD
210 220 230 240 250
GMNAYMAYQL STQTTLPMFR SKSFTVRRRF SDFLGLYEKL SEKHSQNGYI
260 270 280 290 300
VPPPPEKSIL GMTKVKVGKE DSSSAEFVER RRAALERYLQ RVVSHPSLLQ
310 320 330 340 350
DPDVREFLER DELPRAVSTQ TLSGAGFLKM INRATDAVSK MTIKMNESDI
360 370 380 390 400
WFEEKLQEVE LEEQQLRKLH IVVDTLVSHR KELSVNTGVF AKSVAMLGSS
410 420 430 440 450
EDNTALSRAL SQLAEVEDKM EQLHQDQANN DFFVFAELLA DYIRLLGAVR
460 470 480 490 500
GCFDQRMKAW QRWQDAQTML QRKRENEAKL LWANKPEKLQ QAKDEIAEWE
510 520 530 540 550
SKVTQYDTDF ERISATVRKE VLRFEKEKTR DFKKQIIKYL ESLQHSQQQL
560
IKYWEAFLPE AKAIA
Length:565
Mass (Da):64,039
Last modified:June 7, 2017 - v1
Checksum:i5F866D515D264CA5
GO

Sequence databases

RefSeqiXP_018621071.1. XM_018765555.1.

Genome annotation databases

GeneIDi108942306.

Similar proteinsi

Entry informationi

Entry nameiA0A1W5B7A2_9TELE
AccessioniPrimary (citable) accession number: A0A1W5B7A2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: December 20, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported