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Protein
Submitted name:

Glial fibrillary acidic protein

Gene

Gfap

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Glial fibrillary acidic proteinImported
Gene namesi
Name:GfapImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi2679. Gfap.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Intermediate filamentUniRule annotationSAAS annotation

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili13 – 86Sequence analysisAdd BLAST74

Sequence similaritiesi

Belongs to the intermediate filament family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysisSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00830000128228.

Family and domain databases

InterProiView protein in InterPro
IPR027701. GFAP.
IPR001664. IF.
IPR018039. Intermediate_filament_CS.
PANTHERiPTHR23239. PTHR23239. 1 hit.
PTHR23239:SF41. PTHR23239:SF41. 1 hit.
PfamiView protein in Pfam
PF00038. Filament. 1 hit.
PROSITEiView protein in PROSITE
PS00226. IF. 1 hit.

Sequencei

Sequence statusi: Fragment.

A0A1W2Q6C8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XLTDVASRNA ELLRQAKHEA NDYRRQLQAL TCDLESLRGT NESLERQMRE
60 70 80 90 100
QEERHARESA SYQEALARLE EEGQSLKEEM ARHLQEYQDL LNVKLALDIE
110 120 130 140 150
IATYRKLLEG EENRITIPVQ TFSNLQIRGG KSTKEGEGHK VTRHLKRLTI
160
QVIPIQALAR L
Length:161
Mass (Da):18,626
Last modified:June 7, 2017 - v1
Checksum:i081CD8AF39521EE8
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072191 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENSRNOT00000093266; ENSRNOP00000076226; ENSRNOG00000002919.

Entry informationi

Entry nameiA0A1W2Q6C8_RAT
AccessioniPrimary (citable) accession number: A0A1W2Q6C8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 7, 2017
Last sequence update: June 7, 2017
Last modified: October 25, 2017
This is version 5 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported