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Protein
Submitted name:

zinc finger protein 18

Gene

ZNF18

Organism
Tarsius syrichta (Philippine tarsier)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
zinc finger protein 18Imported
Gene namesi
Name:ZNF18Imported
OrganismiTarsius syrichta (Philippine tarsier)Imported
Taxonomic identifieri1868482 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniTarsiiformesTarsiidaeCarlito
Proteomesi
  • UP000189704 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini40 – 119SCAN boxInterPro annotationAdd BLAST80
Domaini211 – 283KRABInterPro annotationAdd BLAST73
Domaini408 – 435C2H2-typeInterPro annotationAdd BLAST28
Domaini436 – 463C2H2-typeInterPro annotationAdd BLAST28
Domaini464 – 491C2H2-typeInterPro annotationAdd BLAST28
Domaini492 – 519C2H2-typeInterPro annotationAdd BLAST28
Domaini520 – 547C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

RepeatSAAS annotation, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

CDDicd07765. KRAB_A-box. 1 hit.
cd07936. SCAN. 1 hit.
Gene3Di3.30.40.10. 1 hit.
InterProiView protein in InterPro
IPR001909. KRAB.
IPR036051. KRAB_dom_sf.
IPR008916. Retrov_capsid_C.
IPR003309. SCAN_dom.
IPR027764. Zfp18/Zfp446.
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
IPR013083. Znf_RING/FYVE/PHD.
PANTHERiPTHR45403. PTHR45403. 1 hit.
PfamiView protein in Pfam
PF01352. KRAB. 1 hit.
PF02023. SCAN. 1 hit.
SMARTiView protein in SMART
SM00349. KRAB. 1 hit.
SM00431. SCAN. 1 hit.
SM00355. ZnF_C2H2. 5 hits.
SUPFAMiSSF109640. SSF109640. 1 hit.
SSF47353. SSF47353. 1 hit.
SSF57667. SSF57667. 3 hits.
PROSITEiView protein in PROSITE
PS50805. KRAB. 1 hit.
PS50804. SCAN_BOX. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 5 hits.
PS50157. ZINC_FINGER_C2H2_2. 5 hits.

Sequencei

Sequence statusi: Complete.

A0A1U7UJ79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPIDIGQALG LPSLAKAEDT QISGSDAALQ EEFSSPETAR QLFRQFRYQV
60 70 80 90 100
MSGPHETLRQ LRKLCFQWLR PEVHTKEQIL EILMLEQFLT ILPGEIQMWV
110 120 130 140 150
RKQCPGSGEE AVTLVESLKG DPRRLWQWIS IQVLGQEILS EKMESPSCQV
160 170 180 190 200
GEVEPHLEVV RQELRLQNSP SGPGEFLSHI VKEESDTEPE LALAAPQLPA
210 220 230 240 250
RHEERLIRSQ DFGASLLPVA PQEQWRHLDS TQKEQYWDLM LETYGKMVSG
260 270 280 290 300
AGISNSKPDS TNLTEYGEEL TGLHFNVIEK IPRPTCVGDR QENDKENLNL
310 320 330 340 350
ENHRDQEPLD ASCQASGEAP SQVSLRGFFS EDEPGCFGEG ENLPEIPQSL
360 370 380 390 400
QDEGMGGQLS SQERNSGKQL GQHLPNPHSE ELSTMWLEEK RETSQKGQPR
410 420 430 440 450
APMAQKLPTC RECGKTFYRN SQLVFHQRTH TGETYFQCPI CKKAFLRSSD
460 470 480 490 500
FVKHQRTHTG EKPCKCDYCG KGFSDFSGLR HHEKIHTGEK PYKCPICEKS
510 520 530 540
FIQRSNFNRH QRVHTGEKPY KCSHCGKSFS WSSSLDKHQR SHLGKKPFQ
Length:549
Mass (Da):62,487
Last modified:May 10, 2017 - v1
Checksum:i37E78B493351FDB4
GO

Sequence databases

RefSeqiXP_008070220.1. XM_008072029.1.

Genome annotation databases

GeneIDi103274591.

Similar proteinsi

Entry informationi

Entry nameiA0A1U7UJ79_TARSY
AccessioniPrimary (citable) accession number: A0A1U7UJ79
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: December 20, 2017
This is version 7 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported