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Protein
Submitted name:

probable global transcription activator SNF2L2 isoform X1

Gene

SMARCA2

Organism
Tarsius syrichta (Philippine tarsier)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
probable global transcription activator SNF2L2 isoform X1Imported
Gene namesi
Name:SMARCA2Imported
OrganismiTarsius syrichta (Philippine tarsier)Imported
Taxonomic identifieri1868482 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniTarsiiformesTarsiidaeCarlito
Proteomesi
  • UP000189704 Componenti: Genome assembly

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini173 – 208QLQInterPro annotationAdd BLAST36
Domaini450 – 522HSAInterPro annotationAdd BLAST73
Domaini750 – 915Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1068 – 1230Helicase C-terminalInterPro annotationAdd BLAST163
Domaini1433 – 1503BromoInterPro annotationAdd BLAST71

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili215 – 255Sequence analysisAdd BLAST41
Coiled coili561 – 584Sequence analysisAdd BLAST24
Coiled coili1513 – 1543Sequence analysisAdd BLAST31

Keywords - Domaini

BromodomainPROSITE-ProRule annotationSAAS annotation, Coiled coilSequence analysis

Family and domain databases

Gene3Di1.20.920.10. 2 hits.
2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR006576. BRK_domain.
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR014978. Gln-Leu-Gln_QLQ.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
IPR030088. SMARCA2.
IPR029295. SnAC.
IPR000330. SNF2_N.
IPR015943. WD40/YVTN_repeat-like_dom.
PANTHERiPTHR10799:SF870. PTHR10799:SF870. 1 hit.
PfamiView protein in Pfam
PF07533. BRK. 1 hit.
PF00439. Bromodomain. 1 hit.
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF14619. SnAC. 1 hit.
PF00176. SNF2_N. 1 hit.
PRINTSiPR00503. BROMODOMAIN.
SMARTiView protein in SMART
SM00592. BRK. 1 hit.
SM00297. BROMO. 1 hit.
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00573. HSA. 1 hit.
SM00951. QLQ. 1 hit.
SM01314. SnAC. 1 hit.
SUPFAMiSSF47370. SSF47370. 1 hit.
SSF52540. SSF52540. 2 hits.
PROSITEiView protein in PROSITE
PS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.
PS51666. QLQ. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1U7THL4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTPTDPGAM PHPGPSPGPG PSPGPILGPS PGPGPSPGSV HSMMGPSPGP
60 70 80 90 100
PSVSHPMPTM GSADFPQEGI HQMHKPIDGM HDKGIVEDIH CGSMKGTSMR
110 120 130 140 150
PLHPGMGPPQ SPMDQHSQGY MSPHPSPLGA PEHVSSPMSG GGPTPPQMPP
160 170 180 190 200
SQPGPLIPGD PQAMSQPNRG PSPFSPVQLH QLRAQILAYK MLARGQPLPE
210 220 230 240 250
TLQLAVQGKR TLPGMQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ
260 270 280 290 300
QQQQQPPPPQ SQPQQQQPAL VNYNRPSGPG PDVLGSSTPQ KLPVPAPSGR
310 320 330 340 350
PSPAPPAAAQ PPTAAVPGPS VPQPAPGQPS PILQLQQKQS RISPIQKPQG
360 370 380 390 400
LDPVEILQER EYRLQARIAH RIQELENLPG SLPPDLRTKA TVELKALRLL
410 420 430 440 450
NFQRQLRQEV VACMRRDTTL ETALNSKAYK RSKRQTLREA RMTEKLEKQQ
460 470 480 490 500
KIEQERKRRQ KHQEYLNSIL QHAKDFKEYH RSVAGKIQKL SKAVATWHAN
510 520 530 540 550
TEREQKKETE RIEKERMRRL MAEDEEGYRK LIDQKKDRRL AYLLQQTDEY
560 570 580 590 600
VANLTNLVWE HKQAQAAKEK KKRRRRKKKA EENAEGGESA LGPDGEPIDE
610 620 630 640 650
SSQMSDLPVK VTHTETGKVL FGPEAPKASQ LDAWLEMNPG YEVAPRSDSE
660 670 680 690 700
ESDSDYEEED EEEESSRQET EEKILLDPNS EEVSEKDAKQ IIETAKQDVD
710 720 730 740 750
DEYSMQYSAR GSQSYYTVAH AISERVEKQS ALLINGTLKH YQLQGLEWMV
760 770 780 790 800
SLYNNNLNGI LADEMGLGKT IQTIALITYL MEHKRLNGPY LIIVPLSTLS
810 820 830 840 850
NWTYEFDKWA PSVVKISYKG TPAMRRSLVP QLRSGKFNVL LTTYEYIIKD
860 870 880 890 900
KHILAKIRWK YMIVDEGHRM KNHHCKLTQV LNTHYVAPRR ILLTGTPLQN
910 920 930 940 950
KLPELWALLN FLLPTIFKSC STFEQWFNAP FAMTGERVDL NEEETILIIR
960 970 980 990 1000
RLHKVLRPFL LRRLKKEVES QLPEKVEYVI KCDMSALQKI LYRHMQAKGI
1010 1020 1030 1040 1050
LLTDGSEKDK KGKGGAKTLM NTIMQLRKIC NHPYMFQHIE ESFAEHLGYS
1060 1070 1080 1090 1100
NGVINGAELY RASGKFELLD RILPKLRATN HRVLLFCQMT SLMTIMEDYF
1110 1120 1130 1140 1150
AFRNFLYLRL DGTTKSEDRA ALLKKFNEPG SQYFIFLLST RAGGLGLNLQ
1160 1170 1180 1190 1200
AADTVVIFDS DWNPHQDLQA QDRAHRIGQQ NEVRVLRLCT VNSVEEKILA
1210 1220 1230 1240 1250
AAKYKLNVDQ KVIQAGMFDQ KSSSHERRAF LQAILEHEEE NEEEDEVPDD
1260 1270 1280 1290 1300
ETLNQMIARR EEEFDLFMRM DMDRRREDAR NPKRKPRLME EDELPSWIIK
1310 1320 1330 1340 1350
DDAEVERLTC EEEEEKIFGR GSRQRRDVDY SDALTEKQWL RAIEDGNLEE
1360 1370 1380 1390 1400
MEEEVRLKKR KRRRNVDKDP AKEDVEKAKK RRGRPPAEKL SPNPPKLTKQ
1410 1420 1430 1440 1450
MNAIIDTVIN YKDRCNVEKV PSNSQLEIEG NSSGRQLSEV FIQLPSRKEL
1460 1470 1480 1490 1500
PEYYELIRKP VDFKKIKERI RNHKYRSLGD LEKDVMLLCH NAQTFNLEGS
1510 1520 1530 1540 1550
QIYEDSIVLQ SVFKSARQKI AKEEESEDES NEEEEEEDEE ESESEAKSVK
1560 1570 1580 1590 1600
VKIKLNKKDE KGRDKGKGKK RPNRGKAKPV VSDFDSDEEQ DEHEQSEASG

TDDE
Length:1,604
Mass (Da):183,159
Last modified:May 10, 2017 - v1
Checksum:i94BF92FEAEC62DC3
GO

Sequence databases

RefSeqiXP_008059528.1. XM_008061337.1.
XP_008059529.1. XM_008061338.1.

Genome annotation databases

GeneIDi103263670.

Similar proteinsi

Entry informationi

Entry nameiA0A1U7THL4_TARSY
AccessioniPrimary (citable) accession number: A0A1U7THL4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: July 5, 2017
This is version 3 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported