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Protein

Tetraspanin

Gene

CD9

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
TetraspaninUniRule annotation
Gene namesi
Name:CD9Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 37HelicalUniRule annotationAdd BLAST26
Transmembranei57 – 80HelicalUniRule annotationAdd BLAST24
Transmembranei87 – 110HelicalUniRule annotationAdd BLAST24
Transmembranei191 – 217HelicalUniRule annotationAdd BLAST27

Keywords - Cellular componenti

Membrane

Family & Domainsi

Sequence similaritiesi

Belongs to the tetraspanin (TM4SF) family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Family and domain databases

Gene3Di1.10.1450.10. 1 hit.
InterProiView protein in InterPro
IPR000301. Tetraspanin.
IPR018499. Tetraspanin/Peripherin.
IPR018503. Tetraspanin_CS.
IPR008952. Tetraspanin_EC2_sf.
PfamiView protein in Pfam
PF00335. Tetraspannin. 1 hit.
PIRSFiPIRSF002419. Tetraspanin. 1 hit.
PRINTSiPR00259. TMFOUR.
SUPFAMiSSF48652. SSF48652. 1 hit.
PROSITEiView protein in PROSITE
PS00421. TM4_1. 1 hit.

Sequencei

Sequence statusi: Complete.

A0A1U7S404-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPVKGGIKCI KYLLFVFNFI FWLAGTAVLA IGLWLRFDAQ TKSIFELESN
60 70 80 90 100
NTTFYTGVYI LIGAGALMML VGFLGCCGAL QESQCMLGLF FAFLLVIFAI
110 120 130 140 150
EIAAAIWGFA NRETVIQEVK DFYTATYQKR SQPAARETLR ALQHALNCCG
160 170 180 190 200
LTGPLEQQFM DTCPKKELLE SLTVLPCPAA IEEIFNSKLN VIGAVGIGIA
210 220
VVMIFGMIFS MILCCAIRRS REMV
Length:224
Mass (Da):24,744
Last modified:May 10, 2017 - v1
Checksum:i98B7394F638EC406
GO

Sequence databases

RefSeqiXP_006028826.1. XM_006028764.1.

Genome annotation databases

GeneIDi102379125.

Similar proteinsi

Entry informationi

Entry nameiA0A1U7S404_ALLSI
AccessioniPrimary (citable) accession number: A0A1U7S404
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: November 22, 2017
This is version 6 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported