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Protein
Submitted name:

protein CBFA2T2 isoform X1

Gene

CBFA2T2

Organism
Alligator sinensis (Chinese alligator)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
protein CBFA2T2 isoform X1Imported
Gene namesi
Name:CBFA2T2Imported
OrganismiAlligator sinensis (Chinese alligator)Imported
Taxonomic identifieri38654 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaCrocodyliaAlligatoridaeAlligatorinaeAlligator
Proteomesi
  • UP000189705 Componenti: Genome assembly

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini117 – 212TAFHInterPro annotationAdd BLAST96
Domaini511 – 547MYND-typeInterPro annotationAdd BLAST37

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili450 – 470Sequence analysisAdd BLAST21
Coiled coili472 – 492Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Gene3Di1.20.120.1110, 1 hit
InterProiView protein in InterPro
IPR013289 CBFA2T1/2/3
IPR013291 MTGR1
IPR014896 NHR2
IPR037249 TAFH/NHR1_dom_sf
IPR003894 TAFH_NHR1
IPR002893 Znf_MYND
PANTHERiPTHR10379 PTHR10379, 1 hit
PfamiView protein in Pfam
PF08788 NHR2, 1 hit
PF07531 TAFH, 1 hit
PF01753 zf-MYND, 1 hit
PRINTSiPR01875 ETOFAMILY
PR01877 MTGR1PROTEIN
SMARTiView protein in SMART
SM00549 TAFH, 1 hit
SUPFAMiSSF158553 SSF158553, 1 hit
PROSITEiView protein in PROSITE
PS51119 TAFH, 1 hit
PS01360 ZF_MYND_1, 1 hit
PS50865 ZF_MYND_2, 1 hit

Sequencei

Sequence statusi: Complete.

A0A1U7S0I9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGIPGAFQC TARSEGMALI SRRLFANEKR LPVMPGSPVE VKIQSRSSPP
60 70 80 90 100
SMPPLPPVNP GGPRPVSFTP TALPNGINHS PPTLNGAPSP PQRFSNAPAS
110 120 130 140 150
SSSSSLTNQQ LPATCGARQL SKLKRFLTTL QQFGNDISPE IGEKVRTLVL
160 170 180 190 200
ALVNSTVTIE EFHCKLQEAT NFPLRPFVIP FLKANLPLLQ RELLHCARAA
210 220 230 240 250
KQTPSQYLAQ HEHILLNTNT TSPADSSELL IEVNGNGKRH SPDRREDSSF
260 270 280 290 300
ERDPLPSEPP AKRVCTISPA PRHSPALTLP LMTSAGQFHP TPPPLQHYTL
310 320 330 340 350
EDIATSHLYR DPSKMLEHRD MRDRHSGLGL NGGYQDELVD HRLTEREWAD
360 370 380 390 400
EWKHLDHALN CIMEMVEKTR RSMAVLRRCQ EADREELNYW KRRYSETADT
410 420 430 440 450
RKGGSELISR QHSPGSSDSI SSDSLREFSS RSGTGYVTEE IWKKAEEAVN
460 470 480 490 500
EVKRQAMSEV QKAVAEAEQK AFEMIASERA RMEQTIADAK RQATEDAFLV
510 520 530 540 550
INEQEESTES CWNCGRKASE TCSGCNIARY CGSFCQHKDW ERHHRICGQG
560 570 580 590 600
LHSQVKPLAL PTGRSSAAAA KAVDGVPSPA LEKTSATTSR SSTPASVTAV

DTNGL
Length:605
Mass (Da):66,766
Last modified:May 10, 2017 - v1
Checksum:i1D472386BC5AF368
GO

Sequence databases

RefSeqiXP_006022304.1, XM_006022242.1

Genome annotation databases

GeneIDi102377968
KEGGiasn:102377968

Similar proteinsi

Entry informationi

Entry nameiA0A1U7S0I9_ALLSI
AccessioniPrimary (citable) accession number: A0A1U7S0I9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 10, 2017
Last sequence update: May 10, 2017
Last modified: April 25, 2018
This is version 12 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health